RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Cd248Q91V98 765 aa21.28■■□□□ 1
Trim54-202ENSMUST00000202769 Golgb1E9PVZ8 3238 aa21.27■■□□□ 1
Trim54-202ENSMUST00000202769 Rbm25B2RY56 838 aaKnown RBP21.27■■□□□ 1
Trim54-202ENSMUST00000202769 NogP97466 232 aa21.27■■□□□ 1
Trim54-202ENSMUST00000202769 Mak16Q8BGS0 296 aaKnown RBP21.27■■□□□ 1
Trim54-202ENSMUST00000202769 Ankrd31A0A140LI88 1765 aa21.27■■□□□ 1
Trim54-202ENSMUST00000202769 Fkbp1aP26883 108 aaKnown RBP21.26■□□□□ 0.99
Trim54-202ENSMUST00000202769 Rapgefl1Q68EF8 662 aa21.26■□□□□ 0.99
Trim54-202ENSMUST00000202769 Susd4Q8BH32 490 aa21.25■□□□□ 0.99
Trim54-202ENSMUST00000202769 Col5a2Q3U962 1497 aa21.25■□□□□ 0.99
Trim54-202ENSMUST00000202769 Ralbp1Q62172 648 aa21.24■□□□□ 0.99
Trim54-202ENSMUST00000202769 Zbtb40Q6PCS8 1258 aa21.24■□□□□ 0.99
Trim54-202ENSMUST00000202769 Zfp831A2ADM8 1628 aa21.24■□□□□ 0.99
Trim54-202ENSMUST00000202769 Cnksr1A2A9K7 700 aa21.23■□□□□ 0.99
Trim54-202ENSMUST00000202769 D830030K20RikE9PYQ5 218 aa21.23■□□□□ 0.99
Trim54-202ENSMUST00000202769 Gm3043K7N693 218 aa21.23■□□□□ 0.99
Trim54-202ENSMUST00000202769 Gm16440K7N6G6 218 aa21.23■□□□□ 0.99
Trim54-202ENSMUST00000202769 Gm2244L7N2A3 218 aa21.23■□□□□ 0.99
Trim54-202ENSMUST00000202769 Gm3278L7N2D2 218 aa21.23■□□□□ 0.99
Trim54-202ENSMUST00000202769 Gm8271L7N2E2 218 aa21.23■□□□□ 0.99
Trim54-202ENSMUST00000202769 Fhdc1Q3ULZ2 1149 aa21.23■□□□□ 0.99
Trim54-202ENSMUST00000202769 Ankib1Q6ZPS6 1085 aa21.23■□□□□ 0.99
Trim54-202ENSMUST00000202769 Spire2Q8K1S6 718 aa21.22■□□□□ 0.99
Trim54-202ENSMUST00000202769 Mtcl1Q3UHU5 1945 aa21.22■□□□□ 0.99
Trim54-202ENSMUST00000202769 Strip1Q8C079 837 aa21.21■□□□□ 0.99
Trim54-202ENSMUST00000202769 Pik3ap1Q9EQ32 811 aa21.21■□□□□ 0.99
Trim54-202ENSMUST00000202769 Sall2Q9QX96 1004 aa21.21■□□□□ 0.99
Trim54-202ENSMUST00000202769 Arap2Q8BZ05 1703 aa21.21■□□□□ 0.99
Trim54-202ENSMUST00000202769 Flt4P35917 1363 aa21.21■□□□□ 0.99
Trim54-202ENSMUST00000202769 CoilQ5SU73 570 aa21.21■□□□□ 0.99
Trim54-202ENSMUST00000202769 Unc5clQ6R653 518 aa21.21■□□□□ 0.99
Trim54-202ENSMUST00000202769 Rbm5Q91YE7 815 aaKnown RBP21.21■□□□□ 0.99
Trim54-202ENSMUST00000202769 Fam122aQ9DB52 284 aa21.21■□□□□ 0.99
Trim54-202ENSMUST00000202769 Foxo3Q9WVH4 672 aa21.21■□□□□ 0.99
Trim54-202ENSMUST00000202769 Olfr247E9PVJ7 320 aa21.2■□□□□ 0.98
Trim54-202ENSMUST00000202769 Olfr819K7N727 320 aa21.2■□□□□ 0.98
Trim54-202ENSMUST00000202769 Cct4P80315 539 aaKnown RBP21.2■□□□□ 0.98
Trim54-202ENSMUST00000202769 Irf9Q61179 399 aa21.2■□□□□ 0.98
Trim54-202ENSMUST00000202769 Rad21Q61550 635 aaKnown RBP21.2■□□□□ 0.98
Trim54-202ENSMUST00000202769 Gjd4Q8BSD4 364 aa21.2■□□□□ 0.98
Trim54-202ENSMUST00000202769 Ptcd1Q8C2E4 695 aaKnown RBP21.2■□□□□ 0.98
Trim54-202ENSMUST00000202769 Ltb4r2Q9JJL9 360 aa21.2■□□□□ 0.98
Trim54-202ENSMUST00000202769 Ank1Q02357 1862 aa21.19■□□□□ 0.98
Trim54-202ENSMUST00000202769 Atxn2lQ7TQH0 1049 aaKnown RBP21.19■□□□□ 0.98
Trim54-202ENSMUST00000202769 Slc34a2Q9DBP0 697 aa21.19■□□□□ 0.98
Trim54-202ENSMUST00000202769 Hsp90ab1P11499 724 aaKnown RBP21.18■□□□□ 0.98
Trim54-202ENSMUST00000202769 Fam83gQ5SWY7 812 aa21.17■□□□□ 0.98
Trim54-202ENSMUST00000202769 Aknad1E9Q8N6 675 aa21.16■□□□□ 0.98
Trim54-202ENSMUST00000202769 NudcO35685 332 aaKnown RBP21.16■□□□□ 0.98
Trim54-202ENSMUST00000202769 Atp6v0a2P15920 856 aa21.16■□□□□ 0.98
Trim54-202ENSMUST00000202769 Cyp2d11P24457 504 aa21.16■□□□□ 0.98
Trim54-202ENSMUST00000202769 Gas2l2Q5SSG4 860 aa21.16■□□□□ 0.98
Trim54-202ENSMUST00000202769 Bicc1Q99MQ1 977 aaKnown RBP21.16■□□□□ 0.98
Trim54-202ENSMUST00000202769 MypnQ5DTJ9 1315 aa21.15■□□□□ 0.98
Trim54-202ENSMUST00000202769 Ksr2Q3UVC0 959 aa21.15■□□□□ 0.98
Trim54-202ENSMUST00000202769 AK157302I3ITR1 129 aa21.14■□□□□ 0.98
Trim54-202ENSMUST00000202769 Aplp1Q03157 653 aa21.14■□□□□ 0.98
Trim54-202ENSMUST00000202769 Atp2b4Q6Q477 1205 aa21.14■□□□□ 0.98
Trim54-202ENSMUST00000202769 Isca1Q9D924 129 aa21.14■□□□□ 0.98
Trim54-202ENSMUST00000202769 Ptf1aQ9QX98 324 aa21.14■□□□□ 0.98
Trim54-202ENSMUST00000202769 Sh3tc1G3X9F6 1346 aa21.14■□□□□ 0.97
Trim54-202ENSMUST00000202769 Vamp4O70480 141 aa21.13■□□□□ 0.97
Trim54-202ENSMUST00000202769 Dok7Q18PE0 504 aa21.13■□□□□ 0.97
Trim54-202ENSMUST00000202769 AbraQ8BUZ1 375 aa21.13■□□□□ 0.97
Trim54-202ENSMUST00000202769 Ccdc30Q8BVF4 654 aa21.13■□□□□ 0.97
Trim54-202ENSMUST00000202769 CfhP06909 1234 aa21.12■□□□□ 0.97
Trim54-202ENSMUST00000202769 Eva1cP58659 440 aa21.12■□□□□ 0.97
Trim54-202ENSMUST00000202769 Myh1Q5SX40 1942 aa21.12■□□□□ 0.97
Trim54-202ENSMUST00000202769 Nup188Q6ZQH8 1759 aa21.12■□□□□ 0.97
Trim54-202ENSMUST00000202769 Myd88P22366 296 aa21.12■□□□□ 0.97
Trim54-202ENSMUST00000202769 XpcP51612 930 aa21.12■□□□□ 0.97
Trim54-202ENSMUST00000202769 Soga3Q6NZL0 945 aa21.12■□□□□ 0.97
Trim54-202ENSMUST00000202769 Echdc1Q9D9V3 322 aa21.12■□□□□ 0.97
Trim54-202ENSMUST00000202769 Disp3A3KFU9 1347 aa21.11■□□□□ 0.97
Trim54-202ENSMUST00000202769 Gm6268A2A3U9 297 aa21.11■□□□□ 0.97
Trim54-202ENSMUST00000202769 Anks4bQ8K3X6 423 aa21.11■□□□□ 0.97
Trim54-202ENSMUST00000202769 Ttc5Q99LG4 440 aa21.11■□□□□ 0.97
Trim54-202ENSMUST00000202769 Col24a1Q30D77 1733 aa21.1■□□□□ 0.97
Trim54-202ENSMUST00000202769 Cyp19a1P28649 503 aa21.1■□□□□ 0.97
Trim54-202ENSMUST00000202769 Thrap3Q569Z6 951 aaKnown RBP21.1■□□□□ 0.97
Trim54-202ENSMUST00000202769 Map3k2Q61083 619 aa21.1■□□□□ 0.97
Trim54-202ENSMUST00000202769 Dpf2Q61103 391 aaKnown RBP21.1■□□□□ 0.97
Trim54-202ENSMUST00000202769 Zfp646Q6NV66 1788 aa21.09■□□□□ 0.97
Trim54-202ENSMUST00000202769 Chl1P70232 1209 aa21.09■□□□□ 0.97
Trim54-202ENSMUST00000202769 Sv2bQ8BG39 683 aa21.09■□□□□ 0.97
Trim54-202ENSMUST00000202769 Ppm1mQ8BU27 406 aa21.09■□□□□ 0.97
Trim54-202ENSMUST00000202769 Rbm17Q8JZX4 405 aaKnown RBP21.09■□□□□ 0.97
Trim54-202ENSMUST00000202769 Foxo4Q9WVH3 505 aa21.09■□□□□ 0.97
Trim54-202ENSMUST00000202769 UtrnE9Q6R7 3430 aa21.08■□□□□ 0.97
Trim54-202ENSMUST00000202769 Igflr1Q3U4N7 345 aa21.08■□□□□ 0.97
Trim54-202ENSMUST00000202769 Gtpbp6Q3U6U5 514 aa21.08■□□□□ 0.97
Trim54-202ENSMUST00000202769 Fkbp5Q64378 456 aa21.08■□□□□ 0.97
Trim54-202ENSMUST00000202769 Ddx58Q6Q899 926 aa21.08■□□□□ 0.97
Trim54-202ENSMUST00000202769 KarsQ99MN1 595 aaKnown RBP21.08■□□□□ 0.97
Trim54-202ENSMUST00000202769 Gja10Q9WUS4 505 aa21.08■□□□□ 0.97
Trim54-202ENSMUST00000202769 Kank1E9Q238 1360 aa21.07■□□□□ 0.96
Trim54-202ENSMUST00000202769 Csf1rP09581 977 aa21.07■□□□□ 0.96
Trim54-202ENSMUST00000202769 Psd3Q2PFD7 1037 aa21.07■□□□□ 0.96
Trim54-202ENSMUST00000202769 GptQ8QZR5 496 aa21.07■□□□□ 0.96
Trim54-202ENSMUST00000202769 Trim26Q99PN3 545 aa21.07■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms