RNA–Protein interactions for RNA: ENSMUST00000176686.7

Cpsf6-207, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

TSL 1 (best) BASIC

Gene Cpsf6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-207ENSMUST00000176686 EspnlQ3UYR4 1005 aa17.9■□□□□ 0.46
Cpsf6-207ENSMUST00000176686 Utp18Q5SSI6 552 aaKnown RBP17.9■□□□□ 0.46
Cpsf6-207ENSMUST00000176686 Pdzrn3Q69ZS0 1063 aa17.9■□□□□ 0.46
Cpsf6-207ENSMUST00000176686 Taf5lQ91WQ5 589 aa17.9■□□□□ 0.46
Cpsf6-207ENSMUST00000176686 Ccdc7Q9D541 371 aa17.9■□□□□ 0.46
Cpsf6-207ENSMUST00000176686 Chmp4cQ9D7F7 232 aa17.9■□□□□ 0.46
Cpsf6-207ENSMUST00000176686 Ttll7A4Q9F0 912 aa17.89■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Tom1O88746 492 aa17.89■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Ddx19aQ61655 478 aaKnown RBP17.89■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Morc2aQ69ZX6 1030 aa17.89■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 TefQ9JLC6 301 aa17.89■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Bcl9lQ67FY2 1494 aa17.89■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Asic4Q7TNS7 539 aa17.88■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Lmbr1lQ9D1E5 489 aa17.88■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Zfp142G5E869 1843 aa17.88■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Prkab2Q6PAM0 271 aa17.88■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 PigbQ9JJQ0 542 aa17.88■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Fam50bQ9WTJ8 334 aa17.88■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Hspa2P17156 633 aa17.87■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 RgmbQ7TQ33 436 aa17.87■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Edc3Q8K2D3 508 aaKnown RBP17.87■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Ppfia1B2RXQ2 1266 aa17.87■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Top1mtQ8R4U6 593 aa17.87■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Slx4ipQ9D7Y9 413 aa17.87■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Trim44Q9QXA7 346 aa17.87■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Shank2Q80Z38 1476 aa17.86■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Ets1P27577 440 aa17.86■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Cnnm1Q0GA42 951 aa17.86■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Zbtb45Q52KG4 520 aa17.86■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Nlrp9bQ66X22 1003 aa17.86■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 PogkQ80TC5 607 aa17.86■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Ssfa2Q922B9 1252 aa17.86■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Add2Q9QYB8 725 aa17.86■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Slc39a6Q8C145 765 aa17.84■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Ipo4Q8VI75 1082 aa17.84■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Glipr1l2Q9CQ35 332 aa17.84■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Elmsan1E9Q2I4 1089 aaKnown RBP17.84■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Gjb2Q00977 226 aa17.84■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Ddx11Q6AXC6 880 aa17.84■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 4930572O03RikQ8C5Y0 211 aa17.84■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Sf3a1Q8K4Z5 791 aaKnown RBP17.84■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 MypnQ5DTJ9 1315 aa17.84■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 PtmaP26350 111 aa17.83■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Larp1Q6ZQ58 1072 aaKnown RBP17.83■□□□□ 0.45
Cpsf6-207ENSMUST00000176686 Gm9992B2RWK3 458 aa17.83■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Unc93aQ710D3 458 aa17.83■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Col4a1P02463 1669 aa17.82■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 4931400O07RikQ9D4M5 137 aa17.82■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Ripor2Q80U16 1078 aa17.81■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Ifit2Q64112 472 aa17.8■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 4930504O13RikQ8C5Z9 145 aa17.8■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Eif3bQ8JZQ9 803 aaKnown RBP17.8■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Cchcr1Q8K2I2 770 aa17.8■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Slc26a8Q8R0C3 999 aa17.8■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Brinp3Q499E0 766 aa17.8■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Cpa2Q504N0 417 aa17.8■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Rufy3Q9D394 469 aa17.8■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Bag3Q9JLV1 577 aaKnown RBP17.8■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Nphp3Q7TNH6 1325 aa17.79■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 InsrrQ9WTL4 1300 aa17.79■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Gadd45bP22339 160 aa17.79■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Adora1Q60612 326 aa17.79■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Jarid2Q62315 1234 aa17.79■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Kcnb2A6H8H5 907 aa17.78■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Kif4P33174 1231 aa17.78■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Rhot2Q8JZN7 620 aa17.78■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Pof1bQ8K4L4 587 aa17.78■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Plekhd1B2RPU2 505 aa17.78■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Efcab2Q9CQ46 164 aa17.78■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 DccP70211 1447 aa17.77■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 NmiO35309 314 aa17.77■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Tti2Q8BGV4 512 aa17.77■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Pdcl3Q8BVF2 240 aa17.77■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Gimap5Q8BWF2 308 aa17.77■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Q9D9S1 216 aa17.77■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 Il1rapl2Q9ERS6 686 aa17.77■□□□□ 0.44
Cpsf6-207ENSMUST00000176686 GpkowQ56A08 488 aa17.76■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Ankle2Q6P1H6 964 aa17.76■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Ubxn10Q8BG34 277 aa17.76■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Gripap1Q8VD04 806 aa17.76■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Txnrd1Q9JMH6 613 aa17.76■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Ank1Q02357 1862 aa17.76■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 1700006A11RikB9EHI3 544 aa17.76■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Tmem87bQ8BKU8 555 aa17.76■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Smc3Q9CW03 1217 aaKnown RBP17.76■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Mst1rQ62190 1378 aa17.76■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Gm21663A0A0G2JE01 267 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Syce3B5KM66 88 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Gm7361D3Z6R1 267 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 5031410I06RikE9Q4E0 267 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Gm1979E9QAN3 267 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Gm5862K7N5V5 267 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Gm10220K7N660 267 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Syt1P46096 421 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Ddx58Q6Q899 926 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Slc5a1Q8C3K6 665 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Ints5Q8CHT3 1018 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Flad1Q8R123 492 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Speer4bQ9D9F7 267 aa17.75■□□□□ 0.43
Cpsf6-207ENSMUST00000176686 Tiam2Q6ZPF3 1715 aa17.75■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 77.7 ms