RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Megf6Q80V70 1572 aa13.06□□□□□ -0.32
Trim61-201ENSMUST00000078409 ThemisQ8BGW0 636 aa13.06□□□□□ -0.32
Trim61-201ENSMUST00000078409 Fam13bQ8K2H3 851 aa13.06□□□□□ -0.32
Trim61-201ENSMUST00000078409 Sumf1Q8R0F3 372 aa13.06□□□□□ -0.32
Trim61-201ENSMUST00000078409 Erbb4Q61527 1308 aa13.06□□□□□ -0.32
Trim61-201ENSMUST00000078409 Parp14Q2EMV9 1817 aa13.06□□□□□ -0.32
Trim61-201ENSMUST00000078409 Mfap1aC0HKD8 439 aaKnown RBP13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Mfap1bC0HKD9 439 aaKnown RBP13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Nkx1-2P42580 305 aa13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Cep126Q0VBV7 1103 aa13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Ccnl1Q52KE7 532 aaKnown RBP13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Larp1Q6ZQ58 1072 aaKnown RBP13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Znf771Q8BJ90 317 aa13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Ppp1r37Q8BKR5 712 aa13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Erich6bQ9D4S6 220 aa13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Tjp1P39447 1745 aaKnown RBP13.05□□□□□ -0.32
Trim61-201ENSMUST00000078409 Cyp2c69E9PXC3 491 aa13.04□□□□□ -0.32
Trim61-201ENSMUST00000078409 CalrP14211 416 aaKnown RBP13.04□□□□□ -0.32
Trim61-201ENSMUST00000078409 Cyp2c40P56657 491 aa13.04□□□□□ -0.32
Trim61-201ENSMUST00000078409 FktnQ8R507 461 aa13.03□□□□□ -0.32
Trim61-201ENSMUST00000078409 Sugt1Q9CX34 336 aa13.03□□□□□ -0.32
Trim61-201ENSMUST00000078409 ScaperF8VQ70 1398 aaKnown RBP13.03□□□□□ -0.32
Trim61-201ENSMUST00000078409 Msh6P54276 1358 aaKnown RBP13.03□□□□□ -0.32
Trim61-201ENSMUST00000078409 Ccdc69Q3TCJ8 202 aa13.03□□□□□ -0.32
Trim61-201ENSMUST00000078409 Isy1Q69ZQ2 285 aaKnown RBP13.03□□□□□ -0.32
Trim61-201ENSMUST00000078409 Trerf1Q8BXJ2 1205 aa13.03□□□□□ -0.32
Trim61-201ENSMUST00000078409 Tbc1d4Q8BYJ6 1307 aa13.03□□□□□ -0.32
Trim61-201ENSMUST00000078409 Crb1Q8VHS2 1405 aa13.03□□□□□ -0.32
Trim61-201ENSMUST00000078409 Ppm1gQ61074 542 aa13.02□□□□□ -0.32
Trim61-201ENSMUST00000078409 Cep131Q62036 1060 aa13.02□□□□□ -0.32
Trim61-201ENSMUST00000078409 Dydc1Q9D9T0 175 aa13.02□□□□□ -0.32
Trim61-201ENSMUST00000078409 NmiO35309 314 aa13.01□□□□□ -0.33
Trim61-201ENSMUST00000078409 Mta1Q8K4B0 715 aaKnown RBP13.01□□□□□ -0.33
Trim61-201ENSMUST00000078409 Trim44Q9QXA7 346 aa13.01□□□□□ -0.33
Trim61-201ENSMUST00000078409 Scp2P32020 547 aaKnown RBP13.01□□□□□ -0.33
Trim61-201ENSMUST00000078409 Taf1dQ9D4V4 322 aa13.01□□□□□ -0.33
Trim61-201ENSMUST00000078409 Tns2Q8CGB6 1400 aa13.01□□□□□ -0.33
Trim61-201ENSMUST00000078409 C4bP01029 1738 aa13.01□□□□□ -0.33
Trim61-201ENSMUST00000078409 IbtkQ6ZPR6 1352 aaKnown RBP13□□□□□ -0.33
Trim61-201ENSMUST00000078409 NcapgE9PWG6 1004 aa13□□□□□ -0.33
Trim61-201ENSMUST00000078409 Zmynd15Q8C0R7 736 aa13□□□□□ -0.33
Trim61-201ENSMUST00000078409 Eif3bQ8JZQ9 803 aaKnown RBP13□□□□□ -0.33
Trim61-201ENSMUST00000078409 Paf1Q8K2T8 535 aa13□□□□□ -0.33
Trim61-201ENSMUST00000078409 Sart3Q9JLI8 962 aaKnown RBP13□□□□□ -0.33
Trim61-201ENSMUST00000078409 Gm13023A2A8N2 498 aa13□□□□□ -0.33
Trim61-201ENSMUST00000078409 Tmed1Q3V009 227 aa13□□□□□ -0.33
Trim61-201ENSMUST00000078409 Mknk2Q8CDB0 459 aa13□□□□□ -0.33
Trim61-201ENSMUST00000078409 Letm1Q9Z2I0 738 aa13□□□□□ -0.33
Trim61-201ENSMUST00000078409 Hdac6Q9Z2V5 1149 aa13□□□□□ -0.33
Trim61-201ENSMUST00000078409 Togaram1Q6A070 1776 aaKnown RBP12.99□□□□□ -0.33
Trim61-201ENSMUST00000078409 Lmod3E9QA62 571 aa12.99□□□□□ -0.33
Trim61-201ENSMUST00000078409 Dhx16G3X8X0 1044 aaKnown RBP12.99□□□□□ -0.33
Trim61-201ENSMUST00000078409 Zfyve9A2A8R0 1397 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 Gm973E9Q295 1059 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 ArsiQ32KI9 573 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 Cyp2c67Q569X9 491 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 Ipo7Q9EPL8 1038 aaKnown RBP12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 Gm21663A0A0G2JE01 267 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 Gm7361D3Z6R1 267 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 5031410I06RikE9Q4E0 267 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 Gm1979E9QAN3 267 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 Gm5862K7N5V5 267 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 Gm10220K7N660 267 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 Smarcc1P97496 1104 aa12.98□□□□□ -0.33
Trim61-201ENSMUST00000078409 Cfap70D3YVL2 1141 aa12.97□□□□□ -0.33
Trim61-201ENSMUST00000078409 Capn2O08529 700 aa12.97□□□□□ -0.33
Trim61-201ENSMUST00000078409 Anp32eP97822 260 aaKnown RBP12.97□□□□□ -0.33
Trim61-201ENSMUST00000078409 Rps6ka5Q8C050 863 aa12.97□□□□□ -0.33
Trim61-201ENSMUST00000078409 Ric1Q69ZJ7 1422 aa12.97□□□□□ -0.33
Trim61-201ENSMUST00000078409 StrcQ8VIM6 1809 aa12.97□□□□□ -0.33
Trim61-201ENSMUST00000078409 Rabep1O35551 862 aa12.96□□□□□ -0.33
Trim61-201ENSMUST00000078409 Akap2O54931 893 aa12.96□□□□□ -0.33
Trim61-201ENSMUST00000078409 NogP97466 232 aa12.96□□□□□ -0.33
Trim61-201ENSMUST00000078409 GorabQ8BRM2 368 aa12.96□□□□□ -0.33
Trim61-201ENSMUST00000078409 Slc5a1Q8C3K6 665 aa12.96□□□□□ -0.33
Trim61-201ENSMUST00000078409 Ush1cQ9ES64 910 aa12.96□□□□□ -0.33
Trim61-201ENSMUST00000078409 Gm45140A0A0N4SUM8 220 aa12.96□□□□□ -0.34
Trim61-201ENSMUST00000078409 Ms4a1P19437 291 aa12.96□□□□□ -0.34
Trim61-201ENSMUST00000078409 Rhbdl3P58873 404 aa12.96□□□□□ -0.34
Trim61-201ENSMUST00000078409 Tshz1Q5DTH5 1084 aa12.96□□□□□ -0.34
Trim61-201ENSMUST00000078409 MycbpQ9EQS3 103 aa12.96□□□□□ -0.34
Trim61-201ENSMUST00000078409 Irx2P81066 474 aa12.95□□□□□ -0.34
Trim61-201ENSMUST00000078409 Stxbp5lQ5DQR4 1185 aa12.95□□□□□ -0.34
Trim61-201ENSMUST00000078409 Klhl23Q6GQU2 558 aa12.95□□□□□ -0.34
Trim61-201ENSMUST00000078409 Rbm43Q99J64 343 aa12.95□□□□□ -0.34
Trim61-201ENSMUST00000078409 Upf1Q9EPU0 1124 aaKnown RBP12.95□□□□□ -0.34
Trim61-201ENSMUST00000078409 PnisrA2AJT4 805 aaKnown RBP12.94□□□□□ -0.34
Trim61-201ENSMUST00000078409 Cbx1P83917 185 aaKnown RBP12.94□□□□□ -0.34
Trim61-201ENSMUST00000078409 VwdeQ6DFV8 926 aa12.94□□□□□ -0.34
Trim61-201ENSMUST00000078409 CpzQ8R4V4 654 aa12.94□□□□□ -0.34
Trim61-201ENSMUST00000078409 Cyp2c68K7N6C2 491 aa12.94□□□□□ -0.34
Trim61-201ENSMUST00000078409 Eya1P97767 591 aa12.94□□□□□ -0.34
Trim61-201ENSMUST00000078409 TrhQ62361 256 aa12.94□□□□□ -0.34
Trim61-201ENSMUST00000078409 Jmjd4Q8BFT6 427 aa12.94□□□□□ -0.34
Trim61-201ENSMUST00000078409 Pde3aQ9Z0X4 1141 aa12.94□□□□□ -0.34
Trim61-201ENSMUST00000078409 Frmpd3A0A140LIW3 1774 aa12.93□□□□□ -0.34
Trim61-201ENSMUST00000078409 NudcO35685 332 aaKnown RBP12.93□□□□□ -0.34
Trim61-201ENSMUST00000078409 Zbtb38Q3LR78 1197 aa12.93□□□□□ -0.34
Trim61-201ENSMUST00000078409 Tspyl2Q7TQI8 677 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms