RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Trim52Q8CDV4 233 aa19.38■□□□□ 0.69
Trim50-201ENSMUST00000065785 Tiam2Q6ZPF3 1715 aa19.38■□□□□ 0.69
Trim50-201ENSMUST00000065785 Gm21680A0A0G2JGR8 267 aa19.37■□□□□ 0.69
Trim50-201ENSMUST00000065785 Cers3Q1A3B0 383 aa19.37■□□□□ 0.69
Trim50-201ENSMUST00000065785 MypnQ5DTJ9 1315 aa19.37■□□□□ 0.69
Trim50-201ENSMUST00000065785 Ttll7A4Q9F0 912 aa19.37■□□□□ 0.69
Trim50-201ENSMUST00000065785 MccE9PWI3 1003 aa19.37■□□□□ 0.69
Trim50-201ENSMUST00000065785 Unc5clQ6R653 518 aa19.37■□□□□ 0.69
Trim50-201ENSMUST00000065785 Zkscan16A2ALW2 728 aa19.36■□□□□ 0.69
Trim50-201ENSMUST00000065785 Nlrp9bQ66X22 1003 aa19.36■□□□□ 0.69
Trim50-201ENSMUST00000065785 Ddx58Q6Q899 926 aa19.36■□□□□ 0.69
Trim50-201ENSMUST00000065785 Ints5Q8CHT3 1018 aa19.36■□□□□ 0.69
Trim50-201ENSMUST00000065785 Zbtb3Q91X45 518 aa19.36■□□□□ 0.69
Trim50-201ENSMUST00000065785 Cyp27a1Q9DBG1 533 aa19.36■□□□□ 0.69
Trim50-201ENSMUST00000065785 Ltbp1Q8CG19 1712 aa19.35■□□□□ 0.69
Trim50-201ENSMUST00000065785 Casq1O09165 405 aa19.35■□□□□ 0.69
Trim50-201ENSMUST00000065785 Hsp90b1P08113 802 aaKnown RBP19.35■□□□□ 0.69
Trim50-201ENSMUST00000065785 Ripor2Q80U16 1078 aa19.35■□□□□ 0.69
Trim50-201ENSMUST00000065785 DiexfQ8BTT6 772 aaKnown RBP19.35■□□□□ 0.69
Trim50-201ENSMUST00000065785 PappaQ8R4K8 1624 aa19.34■□□□□ 0.69
Trim50-201ENSMUST00000065785 Pm20d1Q8C165 503 aa19.34■□□□□ 0.69
Trim50-201ENSMUST00000065785 Pa2g4P50580 394 aaKnown RBP19.33■□□□□ 0.69
Trim50-201ENSMUST00000065785 CalcaP70160 136 aa19.33■□□□□ 0.69
Trim50-201ENSMUST00000065785 Sf3b2Q3UJB0 878 aaKnown RBP19.33■□□□□ 0.69
Trim50-201ENSMUST00000065785 Slc39a6Q8C145 765 aa19.33■□□□□ 0.69
Trim50-201ENSMUST00000065785 LlphQ9D945 130 aaKnown RBP19.33■□□□□ 0.69
Trim50-201ENSMUST00000065785 Zbtb40Q6PCS8 1258 aa19.32■□□□□ 0.68
Trim50-201ENSMUST00000065785 Dmrt2Q8BG36 561 aa19.32■□□□□ 0.68
Trim50-201ENSMUST00000065785 AnlnQ8K298 1121 aaKnown RBP19.32■□□□□ 0.68
Trim50-201ENSMUST00000065785 Brpf1B2RRD7 1212 aa19.32■□□□□ 0.68
Trim50-201ENSMUST00000065785 Fam228bQ497Q6 232 aa19.32■□□□□ 0.68
Trim50-201ENSMUST00000065785 Taf5lQ91WQ5 589 aa19.32■□□□□ 0.68
Trim50-201ENSMUST00000065785 InsrrQ9WTL4 1300 aa19.31■□□□□ 0.68
Trim50-201ENSMUST00000065785 Sf3a1Q8K4Z5 791 aaKnown RBP19.31■□□□□ 0.68
Trim50-201ENSMUST00000065785 Ddit3P35639 168 aa19.3■□□□□ 0.68
Trim50-201ENSMUST00000065785 Tmem87bQ8BKU8 555 aa19.3■□□□□ 0.68
Trim50-201ENSMUST00000065785 Mylk2Q8VCR8 613 aa19.3■□□□□ 0.68
Trim50-201ENSMUST00000065785 Tbc1d4Q8BYJ6 1307 aa19.3■□□□□ 0.68
Trim50-201ENSMUST00000065785 Pmfbp1Q9WVQ0 1022 aa19.3■□□□□ 0.68
Trim50-201ENSMUST00000065785 Nwd2Q6P5U7 1742 aa19.29■□□□□ 0.68
Trim50-201ENSMUST00000065785 Gnat3Q3V3I2 354 aa19.29■□□□□ 0.68
Trim50-201ENSMUST00000065785 Zkscan1Q8BGS3 561 aaKnown RBP19.29■□□□□ 0.68
Trim50-201ENSMUST00000065785 Crb1Q8VHS2 1405 aa19.28■□□□□ 0.68
Trim50-201ENSMUST00000065785 Kcnh4A2A5F7 1018 aa19.28■□□□□ 0.68
Trim50-201ENSMUST00000065785 Ms4a2P20490 235 aa19.28■□□□□ 0.68
Trim50-201ENSMUST00000065785 Fkbp5Q64378 456 aa19.28■□□□□ 0.68
Trim50-201ENSMUST00000065785 Sgsm1Q8BPQ7 1093 aa19.28■□□□□ 0.68
Trim50-201ENSMUST00000065785 Brf1Q8CFK2 676 aa19.28■□□□□ 0.68
Trim50-201ENSMUST00000065785 Syde2E9PUP1 1314 aa19.28■□□□□ 0.68
Trim50-201ENSMUST00000065785 Ssh1Q76I79 1042 aa19.28■□□□□ 0.68
Trim50-201ENSMUST00000065785 Rad50P70388 1312 aa19.27■□□□□ 0.68
Trim50-201ENSMUST00000065785 Mst1rQ62190 1378 aa19.27■□□□□ 0.68
Trim50-201ENSMUST00000065785 Fbln2P37889 1221 aa19.27■□□□□ 0.68
Trim50-201ENSMUST00000065785 Shank3Q4ACU6 1730 aa19.27■□□□□ 0.67
Trim50-201ENSMUST00000065785 Ppfia1B2RXQ2 1266 aa19.26■□□□□ 0.67
Trim50-201ENSMUST00000065785 Vwa3bJ9JI28 736 aa19.26■□□□□ 0.67
Trim50-201ENSMUST00000065785 Soga3Q6NZL0 945 aa19.26■□□□□ 0.67
Trim50-201ENSMUST00000065785 AbraQ8BUZ1 375 aa19.26■□□□□ 0.67
Trim50-201ENSMUST00000065785 PtmsQ9D0J8 101 aaKnown RBP19.26■□□□□ 0.67
Trim50-201ENSMUST00000065785 Smarce1O54941 411 aaKnown RBP19.25■□□□□ 0.67
Trim50-201ENSMUST00000065785 Hspa2P17156 633 aa19.25■□□□□ 0.67
Trim50-201ENSMUST00000065785 4933416C03RikQ3V063 378 aa19.25■□□□□ 0.67
Trim50-201ENSMUST00000065785 GpkowQ56A08 488 aa19.25■□□□□ 0.67
Trim50-201ENSMUST00000065785 Ehd4Q9EQP2 541 aa19.25■□□□□ 0.67
Trim50-201ENSMUST00000065785 Bag3Q9JLV1 577 aaKnown RBP19.25■□□□□ 0.67
Trim50-201ENSMUST00000065785 Mrc1Q61830 1456 aa19.25■□□□□ 0.67
Trim50-201ENSMUST00000065785 Atp6v1dP57746 247 aa19.25■□□□□ 0.67
Trim50-201ENSMUST00000065785 Rhot2Q8JZN7 620 aa19.25■□□□□ 0.67
Trim50-201ENSMUST00000065785 NmiO35309 314 aa19.24■□□□□ 0.67
Trim50-201ENSMUST00000065785 Vps33bP59016 617 aa19.24■□□□□ 0.67
Trim50-201ENSMUST00000065785 Ginm1Q91WR6 327 aa19.24■□□□□ 0.67
Trim50-201ENSMUST00000065785 Ccdc7Q9D541 371 aa19.24■□□□□ 0.67
Trim50-201ENSMUST00000065785 AK157302I3ITR1 129 aa19.23■□□□□ 0.67
Trim50-201ENSMUST00000065785 Ankrd23Q812A3 306 aa19.23■□□□□ 0.67
Trim50-201ENSMUST00000065785 Isca1Q9D924 129 aa19.23■□□□□ 0.67
Trim50-201ENSMUST00000065785 Stk3Q9JI10 497 aa19.23■□□□□ 0.67
Trim50-201ENSMUST00000065785 Gm12185Q5NCB2 835 aa19.23■□□□□ 0.67
Trim50-201ENSMUST00000065785 Adora1Q60612 326 aa19.23■□□□□ 0.67
Trim50-201ENSMUST00000065785 NexnQ7TPW1 607 aa19.23■□□□□ 0.67
Trim50-201ENSMUST00000065785 Jakmip1Q8BVL9 626 aa19.23■□□□□ 0.67
Trim50-201ENSMUST00000065785 Slc26a8Q8R0C3 999 aa19.23■□□□□ 0.67
Trim50-201ENSMUST00000065785 Stard3nlQ9DCI3 235 aa19.23■□□□□ 0.67
Trim50-201ENSMUST00000065785 Ric1Q69ZJ7 1422 aa19.22■□□□□ 0.67
Trim50-201ENSMUST00000065785 Ank1Q02357 1862 aa19.22■□□□□ 0.67
Trim50-201ENSMUST00000065785 Stk11ipQ3TAA7 1072 aa19.22■□□□□ 0.67
Trim50-201ENSMUST00000065785 Top1mtQ8R4U6 593 aa19.22■□□□□ 0.67
Trim50-201ENSMUST00000065785 Cwc25Q9DBF7 416 aa19.22■□□□□ 0.67
Trim50-201ENSMUST00000065785 Col4a1P02463 1669 aa19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 Ets1P27577 440 aa19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 Mcm4P49717 862 aa19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 Ppp4r3aQ6P2K6 820 aa19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 Strn4P58404 760 aa19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 Nlrp1aQ2LKU9 1182 aa19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 Ccnl1Q52KE7 532 aaKnown RBP19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 Utp18Q5SSI6 552 aaKnown RBP19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 Sik1Q60670 779 aa19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 Edc3Q8K2D3 508 aaKnown RBP19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 KinQ8K339 391 aa19.21■□□□□ 0.67
Trim50-201ENSMUST00000065785 Col22a1E9Q7P1 1613 aa19.2■□□□□ 0.66
Trim50-201ENSMUST00000065785 Sos2Q02384 1333 aa19.2■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms