RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	NODAL	Q96S42	347 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZNF559	Q9BR84	538 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	TLE6	Q9H808	572 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	SDF2L1	Q9HCN8	221 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	PPAN	Q9NQ55	473 aa	Known RBP	5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	POLE3	Q9NRF9	147 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	KCNN3	Q9UGI6	736 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	SLC12A6	Q9UHW9	1150 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	MUTYH	Q9UIF7	546 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	ICAM5	Q9UMF0	924 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	FAF1	Q9UNN5	650 aa	Predicted RBP	5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	KCNJ14	Q9UNX9	436 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZNF510	Q9Y2H8	683 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZMYM6	O95789	1325 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	MYO10	Q9HD67	2058 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	WDR87	Q6ZQQ6	2873 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	FRYL	O94915	3013 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	DMXL1	Q9Y485	3027 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	DNAH14	Q0VDD8	3507 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	C2orf92	A0A1B0GVN3	265 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	MAGEB16	A2A368	324 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	RSPH10B2	B2RC85	870 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	C17orf105	B2RV13	164 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	EDIL3	O43854	480 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	FGF17	O60258	216 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	LMX1B	O60663	402 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	NOL3	O60936	208 aa	Known RBP	5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	GAS8	O95995	478 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	UMOD	P07911	640 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	RSPH10B	P0C881	870 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	CDH3	P22223	829 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	SSTR1	P30872	391 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	CSTF2	P33240	577 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	TIMP3	P35625	211 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	GMFB	P60983	142 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	HERV-K104	P61576	105 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	SLC3A1	Q07837	685 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	TRAP1	Q12931	704 aa	Known RBP	5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	PTPN14	Q15678	1187 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	SLC35D3	Q5M8T2	416 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	TEX35	Q5T0J7	233 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	PM20D1	Q6GTS8	502 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	TTC27	Q6P3X3	843 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	CD164L2	Q6UWJ8	174 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	B3GLCT	Q6Y288	498 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	RPAIN	Q86UA6	219 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	CUZD1	Q86UP6	607 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	CROCCP3	Q8IVE0	287 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	CCDC60	Q8IWA6	550 aa	Predicted RBP	5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	LMNTD1	Q8N9Z9	388 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	CLEC1A	Q8NC01	280 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	OR10Q1	Q8NGQ4	319 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	OR52N5	Q8NH56	324 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	PPTC7	Q8NI37	304 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	OLIG1	Q8TAK6	271 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	CCDC110	Q8TBZ0	833 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	DNAJB3	Q8WWF6	145 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	HSD17B8	Q92506	261 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	TOP1MT	Q969P6	601 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	NSL1	Q96IY1	281 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	NSMCE2	Q96MF7	247 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	TCEANC2	Q96MN5	208 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	DDX47	Q9H0S4	455 aa	Known RBP	5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	ABCG4	Q9H172	646 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	MTIF3	Q9H2K0	278 aa	Known RBP	5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	RIMS4	Q9H426	269 aa	Predicted RBP	5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	RNF121	Q9H920	327 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	P4HTM	Q9NXG6	502 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	BLOC1S6	Q9UL45	172 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	STUB1	Q9UNE7	303 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891	FRMPD4	Q14CM0	1322 aa		5.11	□□□□□ -1.59
NRXN1-223	ENST00000625891		A0A087WYN8	130 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	TMEM129	A0AVI4	362 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891		E7EWF7	191 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZBTB5	O15062	677 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	MBTPS2	O43462	519 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	TSHB	P01222	138 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	FGF5	P12034	268 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	CA6	P23280	308 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	CD52	P31358	61 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	SFN	P31947	248 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	VCP	P55072	806 aa	Known RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	IRX4	P78413	519 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	PPP1R8	Q12972	351 aa	Known RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	ABR	Q12979	859 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	DMP1	Q13316	513 aa	Predicted RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	KRTAP24-1	Q3LI83	254 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	PHLDA2	Q53GA4	152 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	PDLIM3	Q53GG5	364 aa	Predicted RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	TECRL	Q5HYJ1	363 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	STPG1	Q5TH74	334 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZNF770	Q6IQ21	691 aa	Predicted RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	KLHL10	Q6JEL2	608 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	IL17REL	Q6ZVW7	336 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	PRUNE1	Q86TP1	453 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	RNASE8	Q8TDE3	154 aa	Known RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	ESR2	Q92731	530 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZNF689	Q96CS4	500 aa	Predicted RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	MRPL38	Q96DV4	380 aa	Known RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	C14orf79	Q96F83	325 aa		5.1	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms