RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 C1QCP02747 245 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 RNH1P13489 461 aaKnown RBP12.98□□□□□ -0.33
TPM1-215ENST00000558868 UQCRBP14927 111 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 PORP16435 677 aaPredicted RBP12.98□□□□□ -0.33
TPM1-215ENST00000558868 ZNF26P17031 533 aaPredicted RBP12.98□□□□□ -0.33
TPM1-215ENST00000558868 MATN1P21941 496 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 MAPK10P53779 464 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 AQP4P55087 323 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 EEF1A2Q05639 463 aaKnown RBP12.98□□□□□ -0.33
TPM1-215ENST00000558868 FAM214AQ32MH5 1076 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 AMZ1Q400G9 498 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 CYBRD1Q53TN4 286 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 CRB2Q5IJ48 1285 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 SWT1Q5T5J6 900 aaKnown RBP12.98□□□□□ -0.33
TPM1-215ENST00000558868 SZRD1Q7Z422 152 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 ARHGEF39Q8N4T4 335 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 Q8N9G6 341 aaPredicted RBP12.98□□□□□ -0.33
TPM1-215ENST00000558868 NFKBIDQ8NI38 313 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 SUN3Q8TAQ9 357 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 MIPOL1Q8TD10 442 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 NAT6Q93015 286 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 MAL2Q969L2 176 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 CCDC74AQ96AQ1 378 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 SDCCAG3Q96C92 435 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 VPS50Q96JG6 964 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 CIB1Q99828 191 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 GAREM1Q9H706 876 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 COQ10BQ9H8M1 238 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 CAPN10Q9HC96 672 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 STARD5Q9NSY2 213 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 PTGFRNQ9P2B2 879 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 P2RX2Q9UBL9 471 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 KNL1Q8NG31 2342 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 GOLGA4Q13439 2230 aaKnown RBP12.97□□□□□ -0.33
TPM1-215ENST00000558868 TECTAO75443 2155 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 FAM149AA5PLN7 773 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 ZNF860A6NHJ4 632 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 SAC3D1A6NKF1 404 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 SGK494L7N484 410 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 PLOD2O00469 737 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 CYR61O00622 381 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 GPR75O95800 540 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 AGR2O95994 175 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 MSL3P1P0C860 447 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 SP9P0CG40 484 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 C8orf89P0DMQ9 161 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 CPMP14384 443 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 CD1CP29017 333 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 MAGEA2P43356 314 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 SELENOWP63302 87 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 OLR1P78380 273 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 SIM1P81133 766 aaPredicted RBP12.97□□□□□ -0.33
TPM1-215ENST00000558868 SHC2P98077 582 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 COL9A2Q14055 689 aaPredicted RBP12.97□□□□□ -0.33
TPM1-215ENST00000558868 MYBPC3Q14896 1274 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 C16orf72Q14CZ0 275 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 TNFAIP8L2Q6P589 184 aaPredicted RBP12.97□□□□□ -0.33
TPM1-215ENST00000558868 SLC23A3Q6PIS1 610 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 BMP8AQ7Z5Y6 402 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 SPRED1Q7Z699 444 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 ZDHHC21Q8IVQ6 265 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 SVOPLQ8N434 492 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 GALNT4Q8N4A0 578 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 HORMAD2Q8N7B1 307 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 FAM86B1Q8N7N1 296 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 C7orf57Q8NEG2 295 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 NUP43Q8NFH3 380 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 OR9A4Q8NGU2 314 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 FAM110BQ8TC76 370 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 RASSF5Q8WWW0 418 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 TBC1D20Q96BZ9 403 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 ELP4Q96EB1 424 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 HSH2DQ96JZ2 352 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 ZNF597Q96LX8 424 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 ZNF570Q96NI8 536 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 ZNF607Q96SK3 696 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 DOHHQ9BU89 302 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 FANCEQ9HB96 536 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 IL1RAPQ9NPH3 570 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 NTMQ9P121 344 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 TRPC4Q9UBN4 977 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 KLHL3Q9UH77 587 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 TRIOO75962 3097 aa12.97□□□□□ -0.33
TPM1-215ENST00000558868 DUXAA6NLW8 204 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 WASHC1A8K0Z3 465 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 H0YIG0 161 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 HMGN4O00479 90 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 ARHGAP33O14559 1287 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 CHST10O43529 356 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 HCRTR1O43613 425 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 ASNA1O43681 348 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 RDH16O75452 317 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 RASAL1O95294 804 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 FABP3P05413 133 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 ZNF23P17027 643 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 DUSP3P51452 185 aaPredicted RBP12.96□□□□□ -0.33
TPM1-215ENST00000558868 CLCN2P51788 898 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 PRKAG1P54619 331 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 CASP9P55211 416 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 PCBP3P57721 371 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms