RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 HTR1EP28566 365 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 ZNF423Q2M1K9 1284 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 Q6ZSR6 202 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 OR4M2Q8NGB6 313 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 GCDHQ92947 438 aaPredicted RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 PIP5K1AQ99755 562 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 ITPAQ9BY32 194 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 ZBTB26Q9HCK0 441 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 ZDHHC18Q9NUE0 388 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 LOC102723532A0A0G2JNH3 316 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 RTCAO00442 366 aaKnown RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 HOXA11P31270 313 aaPredicted RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 APLNRP35414 380 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 GSK3BP49841 420 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 AFF3P51826 1226 aaKnown RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 NKX3-2P78367 333 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 ZNF234Q14588 700 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 ACSBG2Q5FVE4 666 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 SPIN3Q5JUX0 258 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 IDNKQ5T6J7 187 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 TMEM135Q86UB9 458 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 PLPP6Q8IY26 295 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 FAM110BQ8TC76 370 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 IGSF8Q969P0 613 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 DTD2Q96FN9 168 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 CFAP20Q9Y6A4 193 aaKnown RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 C2orf78A6NCI8 922 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 PLOD2O00469 737 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 SCAMP1O15126 338 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 MRPS14O60783 128 aaKnown RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 SASH3O75995 380 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 ZBTB11O95625 1053 aaPredicted RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 ERP29P30040 261 aaKnown RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 DEFB134Q4QY38 66 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 CLLU1OSQ5K130 101 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 PRAMEF17Q5VTA0 474 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 LSMEM2Q8N112 164 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 CLDN19Q8N6F1 224 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 TMEM174Q8WUU8 243 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 SPRYD4Q8WW59 207 aaPredicted RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 FGF13Q92913 245 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 RTP4Q96DX8 246 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 VRK1Q99986 396 aaPredicted RBP11.43□□□□□ -0.58
NEK9-210ENST00000557026 ABRACLQ9P1F3 81 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 ACAD8Q9UKU7 415 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 MKLN1Q9UL63 735 aa11.43□□□□□ -0.58
NEK9-210ENST00000557026 H0YAE9 185 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 ACOX3O15254 700 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 ZNF43P17038 809 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 CFL1P23528 166 aaKnown RBP11.42□□□□□ -0.58
NEK9-210ENST00000557026 FRKP42685 505 aaPredicted RBP11.42□□□□□ -0.58
NEK9-210ENST00000557026 RABGGTBP53611 331 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 DIO3P55073 304 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 ECH1Q13011 328 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 PTPRRQ15256 657 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 SLC18B1Q6NT16 456 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.42□□□□□ -0.58
NEK9-210ENST00000557026 DGLUCYQ7Z3D6 616 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 MARCH9Q86YJ5 346 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 TDHQ8IZJ6 230 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 OR8J1Q8NGP2 316 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 MS4A4AQ96JQ5 239 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 SMG9Q9H0W8 520 aaKnown RBP11.42□□□□□ -0.58
NEK9-210ENST00000557026 TRAPPC13A5PLN9 417 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 PTGESO14684 152 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 ZNF460Q14592 562 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 RAB11BQ15907 218 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 RNF130Q86XS8 419 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 CHERPQ8IWX8 916 aaKnown RBP11.42□□□□□ -0.58
NEK9-210ENST00000557026 ZNF595Q8IYB9 648 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 DCBLD1Q8N8Z6 715 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 CREB3L1Q96BA8 519 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 YIPF4Q9BSR8 244 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 PHF7Q9BWX1 381 aaPredicted RBP11.42□□□□□ -0.58
NEK9-210ENST00000557026 DPAGT1Q9H3H5 408 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 GGT3PA6NGU5 568 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 E7ESA3 106 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 ETV6P41212 452 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 VIPR2P41587 438 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 SGCAQ16586 387 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 CNPY1Q3B7I2 92 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 TECRLQ5HYJ1 363 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 C6orf136Q5SQH8 315 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 ZNF704Q6ZNC4 412 aaPredicted RBP11.42□□□□□ -0.58
NEK9-210ENST00000557026 ZNF367Q7RTV3 350 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 KLHDC8AQ8IYD2 350 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 AQP11Q8NBQ7 271 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 GRPEL2Q8TAA5 225 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 THAP6Q8TBB0 222 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 TOE1Q96GM8 510 aaKnown RBP11.42□□□□□ -0.58
NEK9-210ENST00000557026 TM9SF2Q99805 663 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 EPHX3Q9H6B9 360 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 MMACHCQ9Y4U1 282 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 TNFRSF10CO14798 259 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 PRKD3O94806 890 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 PRH1P02810 166 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 EPHA4P54764 986 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 RHDQ02161 417 aa11.42□□□□□ -0.58
NEK9-210ENST00000557026 VMACQ2NL98 169 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms