RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 OR4K14Q8NGD5 310 aa10.98□□□□□ -0.65
RAB5C-204ENST00000547517 AGR3Q8TD06 166 aa10.98□□□□□ -0.65
RAB5C-204ENST00000547517 FAR1Q8WVX9 515 aa10.98□□□□□ -0.65
RAB5C-204ENST00000547517 ASB15Q8WXK1 588 aa10.98□□□□□ -0.65
RAB5C-204ENST00000547517 TMEM125Q96AQ2 219 aa10.98□□□□□ -0.65
RAB5C-204ENST00000547517 KLHL29Q96CT2 875 aa10.98□□□□□ -0.65
RAB5C-204ENST00000547517 SCMH1Q96GD3 660 aa10.98□□□□□ -0.65
RAB5C-204ENST00000547517 SENP5Q96HI0 755 aaPredicted RBP10.98□□□□□ -0.65
RAB5C-204ENST00000547517 PKNOX2Q96KN3 472 aa10.98□□□□□ -0.65
RAB5C-204ENST00000547517 GAL3ST4Q96RP7 486 aa10.98□□□□□ -0.65
RAB5C-204ENST00000547517 BARD1Q99728 777 aaKnown RBP10.98□□□□□ -0.65
RAB5C-204ENST00000547517 MYOTQ9UBF9 498 aa10.98□□□□□ -0.65
RAB5C-204ENST00000547517 YARS2Q9Y2Z4 477 aaKnown RBP10.98□□□□□ -0.65
RAB5C-204ENST00000547517 SERTM1A2A2V5 107 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 ANKUB1A6NFN9 424 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 GOLGA6L10A6NI86 522 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 A8MVJ9 347 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 TMEM233B4DJY2 109 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 CTIFO43310 598 aaKnown RBP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 NME2P1O60361 137 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 NPHS1O60500 1241 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 RSL1D1O76021 490 aaKnown RBP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 OR6B1O95007 311 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 BPGMP07738 259 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 SP1P08047 785 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 MYZAPP0CAP1 466 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 CPMP14384 443 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 NME2P22392 152 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 SSTR4P31391 388 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 PTGER1P34995 402 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 FEN1P39748 380 aaKnown RBP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 SOX3P41225 446 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 ETV4P43268 484 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 XKP51811 444 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 TRA2BP62995 288 aaKnown RBP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 ELOAQ14241 798 aaKnown RBP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 ARL13AQ5H913 290 aaPredicted RBP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 SLC25A25Q6KCM7 469 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 FAM180BQ6P0A1 224 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 LRIG3Q6UXM1 1119 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 RNF111Q6ZNA4 994 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 TRIM46Q7Z4K8 759 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 EXOC3L1Q86VI1 746 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 ZNF227Q86WZ6 799 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 FAM98AQ8NCA5 519 aaKnown RBP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 OR5L2Q8NGL0 311 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 OR8K3Q8NH51 312 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 C16orf78Q8WTQ4 265 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 NR4A3Q92570 626 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 RASL10BQ96S79 203 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 SLX1AQ9BQ83 275 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 TRIM45Q9H8W5 580 aaPredicted RBP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 CXorf21Q9HAI6 301 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 RRAGDQ9NQL2 400 aaPredicted RBP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 PFDN4Q9NQP4 134 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 HPF1Q9NWY4 346 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 HEY2Q9UBP5 337 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 CES1P1Q9UKY3 287 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 ERVK-11Q9UQG0 969 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 DLGAP4Q9Y2H0 992 aa10.97□□□□□ -0.65
RAB5C-204ENST00000547517 POLR3HQ9Y535 204 aaPredicted RBP10.97□□□□□ -0.65
RAB5C-204ENST00000547517 MYO18BQ8IUG5 2567 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 WDR91A4D1P6 747 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 CDK2AP1O14519 115 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 CBX6O95503 412 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 CHEK2O96017 543 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 CRYABP02511 175 aaKnown RBP10.96□□□□□ -0.65
RAB5C-204ENST00000547517 CLPSP04118 112 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 ANXA4P09525 319 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-204ENST00000547517 CT62P0C5K7 136 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 EDN3P14138 238 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 PORP16435 677 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-204ENST00000547517 GALNSP34059 522 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 SERPINB4P48594 390 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 TDGF1P3P51864 188 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 SLC37A1P57057 533 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 DUSP2Q05923 314 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 ZNF763Q0D2J5 394 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 EIF2S3LQ2VIR3 472 aaKnown RBP10.96□□□□□ -0.65
RAB5C-204ENST00000547517 SH2D4BQ5SQS7 431 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 GALNT18Q6P9A2 607 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 SLC29A4Q7RTT9 530 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-204ENST00000547517 CROCCP2Q86T23 111 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 DDIASQ8IXT1 998 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 ST6GALNAC3Q8NDV1 305 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 OR2T11Q8NH01 316 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 PPP1R14CQ8TAE6 165 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 NUBPLQ8TB37 319 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 PRR7Q8TB68 274 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 TWIST2Q8WVJ9 160 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 EXOSC8Q96B26 276 aaKnown RBP10.96□□□□□ -0.65
RAB5C-204ENST00000547517 C11orf24Q96F05 449 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-204ENST00000547517 FRMD6Q96NE9 622 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 BRINP2Q9C0B6 783 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 TUBB1Q9H4B7 451 aa10.96□□□□□ -0.65
RAB5C-204ENST00000547517 EML4Q9HC35 981 aaKnown RBP10.96□□□□□ -0.65
RAB5C-204ENST00000547517 SSU72Q9NP77 194 aaKnown RBP10.96□□□□□ -0.65
RAB5C-204ENST00000547517 UTS2RQ9UKP6 389 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms