RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 C16orf47Q6ZP98 133 aaPredicted RBP14.99□□□□□ -0.01
DDX55-212ENST00000544738 RTL4Q6ZR62 310 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 RGS9BPQ6ZS82 235 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 CD163Q86VB7 1156 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 PRIMA1Q86XR5 153 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 RNF175Q8N4F7 328 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 GOLM1Q8NBJ4 401 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 FAM57AQ8TBR7 257 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 ZNF721Q8TF20 911 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 ZNF592Q92610 1267 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 RND1Q92730 232 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 ISL2Q96A47 359 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 SORBS1Q9BX66 1292 aaKnown RBP14.99□□□□□ -0.01
DDX55-212ENST00000544738 DDX31Q9H8H2 851 aaKnown RBP14.99□□□□□ -0.01
DDX55-212ENST00000544738 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.99□□□□□ -0.01
DDX55-212ENST00000544738 ATG4BQ9Y4P1 393 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 HRH3Q9Y5N1 445 aa14.99□□□□□ -0.01
DDX55-212ENST00000544738 A0A1B0GTH9 108 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 ACOT7O00154 380 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 CDC40O60508 579 aaKnown RBP eCLIP14.98□□□□□ -0.01
DDX55-212ENST00000544738 SIX3O95343 332 aaPredicted RBP14.98□□□□□ -0.01
DDX55-212ENST00000544738 CTAGE8P0CG41 777 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 ALOX15P16050 662 aaPredicted RBP14.98□□□□□ -0.01
DDX55-212ENST00000544738 CNR1P21554 472 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 ADSLP30566 484 aaPredicted RBP14.98□□□□□ -0.01
DDX55-212ENST00000544738 ARL1P40616 181 aaPredicted RBP14.98□□□□□ -0.01
DDX55-212ENST00000544738 MAGEA12P43365 314 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 HNRNPH2P55795 449 aaKnown RBP14.98□□□□□ -0.01
DDX55-212ENST00000544738 PLGLB1Q02325 96 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 MRM1Q6IN84 353 aaKnown RBP14.98□□□□□ -0.01
DDX55-212ENST00000544738 CYP20A1Q6UW02 462 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 GK5Q6ZS86 529 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 CTAGE4Q8IX94 777 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 OR4N5Q8IXE1 308 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 ST13P4Q8IZP2 240 aaPredicted RBP14.98□□□□□ -0.01
DDX55-212ENST00000544738 CLYBLQ8N0X4 340 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 ZNF321PQ8N8H1 164 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 OR2M7Q8NG81 312 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 NUBPLQ8TB37 319 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 WDR20Q8TBZ3 569 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 PAFAH2Q99487 392 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 SERPINI1Q99574 410 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 FAM173AQ9BQD7 235 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 NTMT1Q9BV86 223 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 NOL11Q9H8H0 719 aaKnown RBP14.98□□□□□ -0.01
DDX55-212ENST00000544738 SLC24A3Q9HC58 644 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 PLSCR2Q9NRY7 297 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 DEPPQ9NTK1 212 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 ZNF358Q9NW07 568 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 RNF11Q9Y3C5 154 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 HCFC1P51610 2035 aa14.98□□□□□ -0.01
DDX55-212ENST00000544738 FN1P02751 2386 aaKnown RBP14.98□□□□□ -0.01
DDX55-212ENST00000544738 STX16-NPEPL1H3BU86 382 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 STX16O14662 325 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 SMIM24O75264 130 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 CTAG2O75638 210 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 GPR75O95800 540 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 IGKV3-11P04433 115 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 FAM58BPP0C7Q3 252 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 BSGP35613 385 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 CCNG1P51959 295 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 TBL3Q12788 808 aaKnown RBP14.97□□□□□ -0.01
DDX55-212ENST00000544738 PIGGQ5H8A4 983 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 NDUFAF5Q5TEU4 345 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 C18orf63Q68DL7 685 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 CLEC9AQ6UXN8 241 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 SLC22A16Q86VW1 577 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 NUDT13Q86X67 352 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 PLD6Q8N2A8 252 aaKnown RBP14.97□□□□□ -0.01
DDX55-212ENST00000544738 SLC15A4Q8N697 577 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 PTGR2Q8N8N7 351 aaPredicted RBP14.97□□□□□ -0.01
DDX55-212ENST00000544738 NOA1Q8NC60 698 aaKnown RBP14.97□□□□□ -0.01
DDX55-212ENST00000544738 LRRN4CLQ8ND94 238 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 OR52N2Q8NGI0 321 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 SLC22A8Q8TCC7 542 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 PHF21BQ96EK2 531 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 RMND5BQ96G75 393 aaPredicted RBP14.97□□□□□ -0.01
DDX55-212ENST00000544738 FBXL20Q96IG2 436 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 SCYL1Q96KG9 808 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 ZNF717Q9BY31 904 aaPredicted RBP14.97□□□□□ -0.01
DDX55-212ENST00000544738 SACM1LQ9NTJ5 587 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 ZNF180Q9UJW8 692 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 EDARQ9UNE0 448 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 ASB4Q9Y574 426 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 STAB1Q9NY15 2570 aa14.97□□□□□ -0.01
DDX55-212ENST00000544738 A0A087WUV0 522 aaPredicted RBP14.96□□□□□ -0.01
DDX55-212ENST00000544738 A0A0A6YYD5 115 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 IQANK1A0A1B0GTG1 560 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 POC1B-GALNT4F8VUJ3 575 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 OR7A17O14581 309 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 EEDO75530 441 aaKnown RBP14.96□□□□□ -0.01
DDX55-212ENST00000544738 SEMA3DO95025 777 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 P04436 131 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 NR2F6P10588 404 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 GALNSP34059 522 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 NEK2P51955 445 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 PPIAP62937 165 aaKnown RBP14.96□□□□□ -0.01
DDX55-212ENST00000544738 PMPCAQ10713 525 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 ZNF750Q32MQ0 723 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 UBAP2Q5T6F2 1119 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms