RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 PTPMT1Q8WUK0 201 aaPredicted RBP13.12□□□□□ -0.31
UBXN1-205ENST00000525004 SNRNP27Q8WVK2 155 aaKnown RBP13.12□□□□□ -0.31
UBXN1-205ENST00000525004 EXOSC8Q96B26 276 aaKnown RBP13.12□□□□□ -0.31
UBXN1-205ENST00000525004 RBM18Q96H35 190 aaKnown RBP13.12□□□□□ -0.31
UBXN1-205ENST00000525004 IMMP1LQ96LU5 166 aa13.12□□□□□ -0.31
UBXN1-205ENST00000525004 MESP1Q9BRJ9 268 aa13.12□□□□□ -0.31
UBXN1-205ENST00000525004 DUSP26Q9BV47 211 aa13.12□□□□□ -0.31
UBXN1-205ENST00000525004 NMUR2Q9GZQ4 415 aa13.12□□□□□ -0.31
UBXN1-205ENST00000525004 SLAMF7Q9NQ25 335 aa13.12□□□□□ -0.31
UBXN1-205ENST00000525004 ZNF639Q9UID6 485 aa13.12□□□□□ -0.31
UBXN1-205ENST00000525004 G3BP2Q9UN86 482 aaKnown RBP13.12□□□□□ -0.31
UBXN1-205ENST00000525004 ZNF780BQ9Y6R6 833 aa13.12□□□□□ -0.31
UBXN1-205ENST00000525004 CFAP47Q6ZTR5 3102 aa13.12□□□□□ -0.31
UBXN1-205ENST00000525004 DYTNA2CJ06 578 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 ZNF891A8MT65 544 aaPredicted RBP13.11□□□□□ -0.31
UBXN1-205ENST00000525004 RNASET2O00584 256 aaKnown RBP13.11□□□□□ -0.31
UBXN1-205ENST00000525004 SLITRK5O94991 958 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 PGRP06401 933 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 COX6A1P12074 109 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 S1PR1P21453 382 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 FEN1P39748 380 aaKnown RBP13.11□□□□□ -0.31
UBXN1-205ENST00000525004 KIR3DL1P43629 444 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 POLR2JP52435 117 aaKnown RBP13.11□□□□□ -0.31
UBXN1-205ENST00000525004 OR4D2P58180 307 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 PLIN5Q00G26 463 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 ID2Q02363 134 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 MAP4K2Q12851 820 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 PRICKLE4Q2TBC4 344 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 ZNF750Q32MQ0 723 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 FAM174BQ3ZCQ3 159 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 SFT2D3Q587I9 215 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 SPANXN4Q5MJ08 99 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 ANKRD26P1Q6NSI1 321 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 FAM180BQ6P0A1 224 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 DGAT2L6Q6ZPD8 337 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 MSANTD1Q6ZTZ1 278 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 CCDC116Q8IYX3 515 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 LRRC25Q8N386 305 aaPredicted RBP13.11□□□□□ -0.31
UBXN1-205ENST00000525004 ZNF675Q8TD23 568 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 THAP4Q8WY91 577 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 ERP27Q96DN0 273 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 VPS50Q96JG6 964 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 AMDHD1Q96NU7 426 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 GLIPR2Q9H4G4 154 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 CXorf21Q9HAI6 301 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 GIMAP4Q9NUV9 329 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 FAM120CQ9NX05 1096 aaKnown RBP13.11□□□□□ -0.31
UBXN1-205ENST00000525004 ERVK-11Q9UQG0 969 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 RAXQ9Y2V3 346 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 ACACBO00763 2458 aa13.11□□□□□ -0.31
UBXN1-205ENST00000525004 PRSS51A0A1B0GVH4 220 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 PLOD2O00469 737 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 FCHO1O14526 889 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 NKX2-8O15522 239 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 PDPK1O15530 556 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 CD1EP15812 388 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 S100A3P33764 101 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 NME5P56597 212 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 LRRC74AQ0VAA2 488 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 FUT7Q11130 342 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 KLF10Q13118 480 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 ZNF628Q5EBL2 1059 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 FAM91A1Q658Y4 838 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 FAAH2Q6GMR7 532 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 OR4F3Q6IEY1 312 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 NDUFAF7Q7L592 441 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 MTDHQ86UE4 582 aaKnown RBP13.1□□□□□ -0.31
UBXN1-205ENST00000525004 MORN4Q8NDC4 146 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 OR14A16Q8NHC5 309 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 GOT1L1Q8NHS2 421 aaPredicted RBP13.1□□□□□ -0.31
UBXN1-205ENST00000525004 DAZLQ92904 295 aaKnown RBP13.1□□□□□ -0.31
UBXN1-205ENST00000525004 CIDECQ96AQ7 238 aaPredicted RBP13.1□□□□□ -0.31
UBXN1-205ENST00000525004 PPWD1Q96BP3 646 aaKnown RBP13.1□□□□□ -0.31
UBXN1-205ENST00000525004 C8orf44Q96CB5 159 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 ZBED6CLQ96FA7 236 aaPredicted RBP13.1□□□□□ -0.31
UBXN1-205ENST00000525004 DGAT2Q96PD7 388 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 BBS4Q96RK4 519 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 ZBTB18Q99592 522 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 LPAR4Q99677 370 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 TUBB6Q9BUF5 446 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 CCDC106Q9BWC9 280 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 TRIM4Q9C037 500 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 SEMA4CQ9C0C4 833 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 P4HTMQ9NXG6 502 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 CCDC167Q9P0B6 97 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 NTMQ9P121 344 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 BTNL2Q9UIR0 455 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 ENTPD4Q9Y227 616 aa13.1□□□□□ -0.31
UBXN1-205ENST00000525004 LOC400499M0QZD8 3231 aa13.09□□□□□ -0.31
UBXN1-205ENST00000525004 A0A087WV62 115 aa13.09□□□□□ -0.31
UBXN1-205ENST00000525004 MYOCOSA0A1B0GUC4 107 aa13.09□□□□□ -0.31
UBXN1-205ENST00000525004 SAGE2PA6NJ88 616 aa13.09□□□□□ -0.31
UBXN1-205ENST00000525004 K7ENP7 123 aa13.09□□□□□ -0.31
UBXN1-205ENST00000525004 NDUFAB1O14561 156 aa13.09□□□□□ -0.31
UBXN1-205ENST00000525004 PLOD3O60568 738 aa13.09□□□□□ -0.31
UBXN1-205ENST00000525004 DDAH2O95865 285 aa13.09□□□□□ -0.31
UBXN1-205ENST00000525004 HPP00738 406 aa13.09□□□□□ -0.31
UBXN1-205ENST00000525004 IGKV3-11P04433 115 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms