RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 WDR53Q7Z5U6 358 aaPredicted RBP16.86■□□□□ 0.29
NUP54-205ENST00000507257 IQCF2Q8IXL9 164 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 LRRC56Q8IYG6 542 aaPredicted RBP16.86■□□□□ 0.29
NUP54-205ENST00000507257 SIX5Q8N196 739 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 TM9SF4Q92544 642 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 C1GALT1C1Q96EU7 318 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 ZNF582Q96NG8 517 aaPredicted RBP16.86■□□□□ 0.29
NUP54-205ENST00000507257 UBL7Q96S82 380 aaPredicted RBP16.86■□□□□ 0.29
NUP54-205ENST00000507257 PKP4Q99569 1192 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 BRD9Q9H8M2 597 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 B3GAT2Q9NPZ5 323 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 TRPM5Q9NZQ8 1165 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 SLC23A1Q9UHI7 598 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 ACSL6Q9UKU0 697 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 PRELID1Q9Y255 219 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 EXOSC1Q9Y3B2 195 aaKnown RBP16.86■□□□□ 0.29
NUP54-205ENST00000507257 HELZP42694 1942 aaKnown RBP16.86■□□□□ 0.29
NUP54-205ENST00000507257 SNTNA6NMZ2 147 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 SGTAO43765 313 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 SLC19A2O60779 497 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 SLC22A5O76082 557 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 ACP2P11117 423 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 MAPK12P53778 367 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 NAE1Q13564 534 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 CDH18Q13634 790 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 CRTC2Q53ET0 693 aaPredicted RBP16.86■□□□□ 0.29
NUP54-205ENST00000507257 TMEM107Q6UX40 140 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 IKBIPQ70UQ0 350 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 FAM20CQ8IXL6 584 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 ATF6BQ99941 703 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 TMEM39AQ9NV64 488 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 MARCH5Q9NX47 278 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 GLTPQ9NZD2 209 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 MBD1Q9UIS9 605 aaPredicted RBP16.86■□□□□ 0.29
NUP54-205ENST00000507257 CLCA3PQ9Y6N3 262 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 RNF215Q9Y6U7 377 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 A0A1W2PRB8 838 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 PRKYO43930 277 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 SOD1P00441 154 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 HMGA1P17096 107 aaKnown RBP16.85■□□□□ 0.29
NUP54-205ENST00000507257 GALP22466 123 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 CASP9P55211 416 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 PER3P56645 1201 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 SNRPD2P62316 118 aaKnown RBP16.85■□□□□ 0.29
NUP54-205ENST00000507257 SLCO4C1Q6ZQN7 724 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 COMMD6Q7Z4G1 85 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 UBE2J2Q8N2K1 259 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 NATD1Q8N6N6 113 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 GPR156Q8NFN8 814 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 GPR32P1Q8NGA4 272 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 C16orf78Q8WTQ4 265 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 SOCS4Q8WXH5 440 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 LINC01599Q8WXQ3 324 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 TMEM203Q969S6 136 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 CIDECQ96AQ7 238 aaPredicted RBP16.85■□□□□ 0.29
NUP54-205ENST00000507257 VOPP1Q96AW1 172 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 ARHGAP9Q9BRR9 750 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 NARFLQ9H6Q4 476 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 RANBP3Q9H6Z4 567 aaPredicted RBP16.85■□□□□ 0.29
NUP54-205ENST00000507257 TAS2R7Q9NYW3 318 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 COMMD3Q9UBI1 195 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 POLHQ9Y253 713 aa16.85■□□□□ 0.29
NUP54-205ENST00000507257 KIF26AQ9ULI4 1882 aaPredicted RBP16.85■□□□□ 0.29
NUP54-205ENST00000507257 ZNF197O14709 1029 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 PRODHO43272 600 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 TLX2O43763 284 aaPredicted RBP16.84■□□□□ 0.29
NUP54-205ENST00000507257 SH3BP5O60239 455 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 SEMA7AO75326 666 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 ZNF821O75541 412 aaPredicted RBP16.84■□□□□ 0.29
NUP54-205ENST00000507257 IGFBP1P08833 259 aaPredicted RBP16.84■□□□□ 0.29
NUP54-205ENST00000507257 IRF1P10914 325 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 SPINT3P49223 89 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 CDK5Q00535 292 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 FABP5Q01469 135 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 ACSM1Q08AH1 577 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 C2orf80Q0P641 193 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 P2RY14Q15391 338 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 ADNP2Q6IQ32 1131 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 FUT10Q6P4F1 479 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 TMIGD1Q6UXZ0 262 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 MRGPREQ86SM8 312 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 GLRX5Q86SX6 157 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 SLC37A3Q8NCC5 494 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 ZNF485Q8NCK3 441 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 OR2AP1Q8NGE2 309 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 ACOT12Q8WYK0 555 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 NLNQ9BYT8 704 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 EMC7Q9NPA0 242 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 TVP23BQ9NYZ1 205 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 ING4Q9UNL4 249 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 KCNE2Q9Y6J6 123 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 ANAPC1Q9H1A4 1944 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 TRAV19A0A0A6YYK7 116 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 C7orf66A4D0T2 115 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 CASKO14936 926 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 HPGDSO60760 199 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 LHCGRP22888 699 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 SLC6A1P30531 599 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 GKP32189 559 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 EVI2BP34910 448 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms