RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 STT3AP46977 705 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 KCNC1P48547 511 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ART1P52961 327 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 SMAD3P84022 425 aaKnown RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 SEMG2Q02383 582 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 SERINC3Q13530 473 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 FNDC3BQ53EP0 1204 aaKnown RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 NANOGP8Q6NSW7 305 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 TMEM205Q6UW68 189 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 WASH2PQ6VEQ5 465 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 C3P1Q6ZMU1 363 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 CREB3L2Q70SY1 520 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 SLC22A15Q8IZD6 547 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 CLDN19Q8N6F1 224 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 DNAAF1Q8NEP3 725 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ATP6V1C2Q8NEY4 427 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 UPF1Q92900 1129 aaKnown RBP eCLIP5.85□□□□□ -1.471e-8■■■□□ 14.6
HNRNPU-208ENST00000475997 FUBP3Q96I24 572 aaKnown RBP eCLIP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 MYRFLQ96LU7 910 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 RIPOR3Q96MK2 946 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 NANOGQ9H9S0 305 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 TREX1Q9NSU2 369 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 C14orf119Q9NWQ9 140 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 KIF25Q9UIL4 384 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 CDC14AQ9UNH5 594 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 SCML2Q9UQR0 700 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 A0A1W2PRB8 838 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 OR6C75A6NL08 312 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ACOT8O14734 319 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 CAPN5O15484 640 aaPredicted RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 TLX2O43763 284 aaPredicted RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 MT-CO2P00403 227 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 UBBP0CG47 229 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 UBCP0CG48 685 aaKnown RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 TPT1P13693 172 aaKnown RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 RPL17P18621 184 aaKnown RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 CHATP28329 748 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 CORO1AP31146 461 aaKnown RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 HOXC12P31275 282 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 GDF5P43026 501 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 PTGER3P43115 390 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 TAS2R31P59538 309 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 DSTNP60981 165 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ST3GAL4Q11206 333 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 PPIGQ13427 754 aaKnown RBP eCLIP5.85□□□□□ -1.476e-7■■■■□ 23.3
HNRNPU-208ENST00000475997 ATP6AP1Q15904 470 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 KDELC1Q6UW63 502 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 LARP4Q71RC2 724 aaKnown RBP eCLIP5.85□□□□□ -1.471e-11■■■□□ 16.6
HNRNPU-208ENST00000475997 MRPL41Q8IXM3 137 aaKnown RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 COX18Q8N8Q8 333 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 PROKR2Q8NFJ6 384 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 GRIN3AQ8TCU5 1115 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 LRCH3Q96II8 777 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ALPK1Q96QP1 1244 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 RANBP9Q96S59 729 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 MGLLQ99685 303 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 URM1Q9BTM9 101 aaKnown RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 TMEM248Q9NWD8 314 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 FAM230AA0A1W2PPH8 454 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 KRBA1A5PL33 1030 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 MYADML2A6NDP7 307 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 SCGB2A1O75556 95 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 AHSA1O95433 338 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ITGA5P08648 1049 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 G6PDP11413 515 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ELNP15502 786 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 GNRHRP30968 328 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 FRKP42685 505 aaPredicted RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ATP4BP51164 291 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 CASP9P55211 416 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 KCNC4Q03721 635 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 RNASE10Q5GAN6 216 aaKnown RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 C6orf136Q5SQH8 315 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 TMEM236Q5W0B7 351 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 GPR139Q6DWJ6 353 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 C12orf40Q86WS4 652 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 MFSD6LQ8IWD5 586 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 CNTN4Q8IWV2 1026 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 GPR135Q8IZ08 494 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ALDH16A1Q8IZ83 802 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 FIBCD1Q8N539 461 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 MS4A15Q8N5U1 240 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 TMEM102Q8N9M5 508 aaPredicted RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 OR2AP1Q8NGE2 309 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 OR10Q1Q8NGQ4 319 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 C1orf74Q96LT6 269 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 CD180Q99467 661 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 TXN2Q99757 166 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 SPIN2AQ99865 258 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 SPIN2BQ9BPZ2 258 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 POLE4Q9NR33 117 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 NLKQ9UBE8 527 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 GLYATL1P3A0A0U1RQE8 302 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 TRBC2A0A5B9 178 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 MITFO75030 526 aaPredicted RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 WDPCPO95876 746 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ERCC1P07992 297 aaPredicted RBP5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 SLC35G6P0C7Q6 338 aa5.85□□□□□ -1.47
HNRNPU-208ENST00000475997 ZNF865P0CJ78 1059 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms