RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GALNSP34059 522 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 SERPINB4P48594 390 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 ALDH9A1P49189 494 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 CYB561P49447 251 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 HLCSP50747 726 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 RNF4P78317 190 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 BTKQ06187 659 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 ZNF763Q0D2J5 394 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 C6orf163Q5TEZ5 329 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 SPINK14Q6IE38 97 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 RNF111Q6ZNA4 994 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 C16orf47Q6ZP98 133 aaPredicted RBP11.98□□□□□ -0.49
COL5A1-206ENST00000465877 RNF165Q6ZSG1 346 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 TRIM46Q7Z4K8 759 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 ZNF227Q86WZ6 799 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 GALNT12Q8IXK2 581 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 CYP4Z2PQ8N1L4 340 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 HORMAD2Q8N7B1 307 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 BCORP1Q8N888 145 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 TMEM178AQ8NBL3 297 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 OR4K14Q8NGD5 310 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 OR8K3Q8NH51 312 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 CDC26Q8NHZ8 85 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 AGR3Q8TD06 166 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 TWIST2Q8WVJ9 160 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 RIT1Q92963 219 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 TAAR6Q96RI8 345 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 RRAGDQ9NQL2 400 aaPredicted RBP11.98□□□□□ -0.49
COL5A1-206ENST00000465877 KLHL1Q9NR64 748 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL5A1-206ENST00000465877 SIRT5Q9NXA8 310 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 MYOTQ9UBF9 498 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 HEY2Q9UBP5 337 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 CES1P1Q9UKY3 287 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 POLR3HQ9Y535 204 aaPredicted RBP11.98□□□□□ -0.49
COL5A1-206ENST00000465877 PCDHGB6Q9Y5F9 930 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 ESPL1Q14674 2120 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 ZGRF1Q86YA3 2104 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 PTPN13Q12923 2485 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 ERAL1O75616 437 aaKnown RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 ZWINTO95229 277 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 RASAL1O95294 804 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 CHEK2O96017 543 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 CLPSP04118 112 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 NEFHP12036 1026 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 PRPH2P23942 346 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 ARRB2P32121 409 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 SERPINB5P36952 375 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 GSTM5P46439 218 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 SSR4P51571 173 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 XKP51811 444 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 TDGF1P3P51864 188 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 MRPL49Q13405 166 aaKnown RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 ZNF267Q14586 743 aaPredicted RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 ARL13AQ5H913 290 aaPredicted RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 SH2D4BQ5SQS7 431 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 TMEM156Q8N614 296 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 NUBPLQ8TB37 319 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 DOK4Q8TEW6 326 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 C16orf78Q8WTQ4 265 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 CNRIP1Q96F85 164 aaPredicted RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 SENP5Q96HI0 755 aaPredicted RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 GAL3ST4Q96RP7 486 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 RASL10BQ96S79 203 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 SLX1AQ9BQ83 275 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 STMN4Q9H169 189 aaPredicted RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 TRIM45Q9H8W5 580 aaPredicted RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 LIN28AQ9H9Z2 209 aaKnown RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 CXorf21Q9HAI6 301 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 EML4Q9HC35 981 aaKnown RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 OLAHQ9NV23 265 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 DLGAP4Q9Y2H0 992 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 YARS2Q9Y2Z4 477 aaKnown RBP11.97□□□□□ -0.49
COL5A1-206ENST00000465877 CCL27Q9Y4X3 112 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 DNAJC15Q9Y5T4 150 aa11.97□□□□□ -0.49
COL5A1-206ENST00000465877 NPIPB8E9PQR5 432 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 WWP2O00308 870 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 SLC28A1O00337 649 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 RGS14O43566 566 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 NME2P1O60361 137 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 ATP1B1P05026 303 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 ANXA4P09525 319 aaPredicted RBP11.96□□□□□ -0.49
COL5A1-206ENST00000465877 CT62P0C5K7 136 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 DHRS4L1P0CG22 281 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 EDN3P14138 238 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 DRD2P14416 443 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 PORP16435 677 aaPredicted RBP11.96□□□□□ -0.49
COL5A1-206ENST00000465877 NT5EP21589 574 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 NME2P22392 152 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 SSTR4P31391 388 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 PTGER1P34995 402 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 SOX3P41225 446 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 SLC37A1P57057 533 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 RPL38P63173 70 aaKnown RBP11.96□□□□□ -0.49
COL5A1-206ENST00000465877 DUSP2Q05923 314 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 EBPQ15125 230 aaKnown RBP11.96□□□□□ -0.49
COL5A1-206ENST00000465877 ZNF750Q32MQ0 723 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 FAM180BQ6P0A1 224 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 SLC29A4Q7RTT9 530 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 GALNTL5Q7Z4T8 443 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms