RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, human

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-208	ENST00000431611	ACTR8	Q9H981	624 aa		13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	PROK2	Q9HC23	129 aa		13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	ACKR4	Q9NPB9	350 aa		13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	LYAR	Q9NX58	379 aa	Known RBP	13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	QPCTL	Q9NXS2	382 aa		13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	DNAJB12	Q9NXW2	375 aa	Known RBP	13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	B4GALT7	Q9UBV7	327 aa		13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	ACOT9	Q9Y305	439 aa		13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	TSC22D4	Q9Y3Q8	395 aa		13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	PCDHGB3	Q9Y5G1	929 aa		13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	C2CD3	Q4AC94	2353 aa		13.93	□□□□□ -0.18
CSNK1E-208	ENST00000431611	GLOD5	A6NK44	160 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	OR6C76	A6NM76	312 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	WASHC1	A8K0Z3	465 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	SYCE1L	A8MT33	242 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	MTHFD2	P13995	350 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	STX2	P32856	288 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	TRPC1	P48995	793 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	IST1	P53990	364 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	PLTP	P55058	493 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	SLC37A1	P57057	533 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	SETDB1	Q15047	1291 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	EBP	Q15125	230 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CYP20A1	Q6UW02	462 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CCDC25	Q86WR0	208 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	ULK2	Q8IYT8	1036 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	TAGAP	Q8N103	731 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	RHEBL1	Q8TAI7	183 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	NEIL3	Q8TAT5	605 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	FBF1	Q8TES7	1133 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	KCTD4	Q8WVF5	259 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	REPS1	Q96D71	796 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	WDR41	Q9HAD4	459 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CNOT11	Q9UKZ1	510 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611	ASB4	Q9Y574	426 aa		13.92	□□□□□ -0.18
CSNK1E-208	ENST00000431611		A0A1W2PR48	441 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	HSPB2	A8KAH6	182 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611		H0YIV9	168 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	TMPRSS11D	O60235	418 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	EED	O75530	441 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CTAG2	O75638	210 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	LRAT	O95237	230 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	FAM58BP	P0C7Q3	252 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	NR2F6	P10588	404 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	GFAP	P14136	432 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	GALNS	P34059	522 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	BSG	P35613	385 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	MAGEA4	P43358	317 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	KIR2DL3	P43628	341 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CAV1	Q03135	178 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	NAB1	Q13506	487 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CUL3	Q13618	768 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	SNTB1	Q13884	538 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	HSPB2	Q16082	182 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	NTRK2	Q16620	822 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	PFKFB4	Q16877	469 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	FAM83E	Q2M2I3	478 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	TBCEL	Q5QJ74	424 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	TMEM198	Q66K66	360 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	MRM1	Q6IN84	353 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	ZZZ3	Q8IYH5	903 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CENPL	Q8N0S6	344 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	DIO2	Q92813	273 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	ZNF717	Q9BY31	904 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	POLDIP3	Q9BY77	421 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	DDX31	Q9H8H2	851 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	UTP11	Q9Y3A2	253 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	HCFC1	P51610	2035 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611	ZNF407	Q9C0G0	2248 aa		13.91	□□□□□ -0.18
CSNK1E-208	ENST00000431611		A0A087X1B8	175 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611		A0A0A6YYD5	115 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	C2orf92	A0A1B0GVN3	265 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	ANKRD33B	A6NCL7	494 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CAPN14	A8MX76	684 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	TP53I11	O14683	189 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	UGDH	O60701	494 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	C2	P06681	752 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	SLC35E2	P0CK97	266 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	GDF1	P27539	372 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	UQCRC1	P31930	480 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	PEX19	P40855	299 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	ALDH18A1	P54886	795 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	IRF9	Q00978	393 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	C2orf54	Q08AI8	447 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	SEM1	Q6ZVN7	128 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CCDC91	Q7Z6B0	441 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	NUDT13	Q86X67	352 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	FBXO25	Q8TCJ0	367 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	UCN3	Q969E3	161 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	TP53INP1	Q96A56	240 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	ZNF597	Q96LX8	424 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	IPPK	Q9H8X2	491 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	PSD3	Q9NYI0	1048 aa		13.9	□□□□□ -0.18
CSNK1E-208	ENST00000431611	CCDC189	A1A4V9	331 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	LRRC14B	A6NHZ5	514 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	AHRR	A9YTQ3	701 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SYT5	O00445	386 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms