RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 NDUFAF5Q5TEU4 345 aa14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 OR4C11Q6IEV9 310 aa14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 CCDC81Q6ZN84 652 aa14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 SETD9Q8NE22 299 aa14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 OR2L8Q8NGY9 312 aa14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 APOBEC4Q8WW27 367 aaKnown RBP14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 DNASE1L2Q92874 299 aa14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 THSD1Q9NS62 852 aa14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 RNF6Q9Y252 685 aa14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 ANGPT4Q9Y264 503 aa14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.39□□□□□ -0.11
SCAMP4-202ENST00000409472 TRBV23OR9-2A0A075B6M9 112 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 HMGN4O00479 90 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 PRICKLE3O43900 615 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 NME6O75414 186 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 FRKP42685 505 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 TNFRSF4P43489 277 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 NPTX1Q15818 432 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 SPDYE7PQ495Y7 208 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 NUDT18Q6ZVK8 323 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 PAGE2Q7Z2X7 111 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 C6orf120Q7Z4R8 191 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 RBM45Q8IUH3 476 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 CCDC103Q8IW40 242 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 OR2L3Q8NG85 312 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 OR5P2Q8WZ92 322 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 OR1E3Q8WZA6 343 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 NACC2Q96BF6 587 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 DUSP21Q9H596 190 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 DDX31Q9H8H2 851 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 AMBNQ9NP70 447 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 MRPS30Q9NP92 439 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 ACER3Q9NUN7 267 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 POU2F3Q9UKI9 436 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 SNX5Q9Y5X3 404 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 PRSS38A1L453 326 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 PGRMC2O15173 223 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 ADAMDEC1O15204 470 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 ERI3O43414 337 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 TMBIM6P55061 237 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 MVKQ03426 396 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 TOP3AQ13472 1001 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 AHSA2Q719I0 299 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 ZNF605Q86T29 641 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 OR4D11Q8NGI4 311 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 GEMIN6Q8WXD5 167 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 GTPBP3Q969Y2 492 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 MAGED4Q96JG8 741 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 APOL4Q9BPW4 351 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 GLIPR2Q9H4G4 154 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 ANKRA2Q9H9E1 313 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 HMG20AQ9NP66 347 aa14.38□□□□□ -0.11
SCAMP4-202ENST00000409472 SPEGQ15772 3267 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 LAMA1P25391 3075 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 CLDN25C9JDP6 229 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 FAM20BO75063 409 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 JUNDP17535 347 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 ITIH1P19827 911 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 CERS1P27544 350 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 ALDH4A1P30038 563 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 ACSL1P33121 698 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 LIMS1P48059 325 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 RAB8AP61006 207 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 GPR19Q15760 415 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 SYPL1Q16563 259 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 REEP3Q6NUK4 255 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 TSPYL5Q86VY4 417 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 BPHLQ86WA6 291 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 SHISA5Q8N114 240 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 ZNF540Q8NDQ6 660 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 MS4A6EQ96DS6 147 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 HRASLS5Q96KN8 279 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 WDR12Q9GZL7 423 aaKnown RBP14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 RAD21L1Q9H4I0 556 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 NT5DC2Q9H857 520 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 ATG4BQ9Y4P1 393 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 ARHGEF17Q96PE2 2063 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 FANCMQ8IYD8 2048 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 COL4A2P08572 1712 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 CACNB4O00305 520 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 CLEC3AO75596 197 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 DNAJB5O75953 348 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 C8orf89P0DMQ9 161 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 NUDT6P53370 316 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 TPTEP56180 551 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 OCA2Q04671 838 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 DGCR6Q14129 220 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 ZIC1Q15915 447 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 MICAQ29983 383 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 C18orf63Q68DL7 685 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 LACC1Q8IV20 430 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 OR4E2Q8NGC2 313 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 TSACCQ96A04 125 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 MED30Q96HR3 178 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 YIPF4Q9BSR8 244 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 PCDHGA2Q9Y5H1 932 aa14.37□□□□□ -0.11
SCAMP4-202ENST00000409472 VCANP13611 3396 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 KNL1Q8NG31 2342 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 TRBV4-1A0A0J9YWV2 114 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 A0A1W2PR48 441 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms