RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 MRPL3P09001 348 aaKnown RBP16.62■□□□□ 0.25
PTPRU-202ENST00000373779 TRAM1Q15629 374 aa16.62■□□□□ 0.25
PTPRU-202ENST00000373779 TAF8Q7Z7C8 310 aa16.62■□□□□ 0.25
PTPRU-202ENST00000373779 CCDC28AQ8IWP9 274 aa16.62■□□□□ 0.25
PTPRU-202ENST00000373779 NRSN1Q8IZ57 195 aa16.62■□□□□ 0.25
PTPRU-202ENST00000373779 RTP3Q9BQQ7 232 aa16.62■□□□□ 0.25
PTPRU-202ENST00000373779 KLF16Q9BXK1 252 aaPredicted RBP16.62■□□□□ 0.25
PTPRU-202ENST00000373779 A0A1W2PRG6 482 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 PLD2O14939 933 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 MTHFD2P13995 350 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 XKR7Q5GH72 579 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 KLHL24Q6TFL4 600 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 ZNF782Q6ZMW2 699 aaPredicted RBP16.61■□□□□ 0.25
PTPRU-202ENST00000373779 KLBQ86Z14 1044 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 VWA5B2Q8N398 1253 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 NUP43Q8NFH3 380 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 C5orf34Q96MH7 638 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 HDHD5Q9BXW7 423 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 LIPT1Q9Y234 373 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 PRKYO43930 277 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 ZCCHC12Q6PEW1 402 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 C7orf57Q8NEG2 295 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 SETD6Q8TBK2 473 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 ASB15Q8WXK1 588 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 CAPNS2Q96L46 248 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 LHX3Q9UBR4 397 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 ACSL5Q9ULC5 683 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 FEZF1A0PJY2 475 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 OR14I1A6ND48 311 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 EMC8O43402 210 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 RPP14O95059 124 aaKnown RBP16.61■□□□□ 0.25
PTPRU-202ENST00000373779 S100A9P06702 114 aaKnown RBP16.61■□□□□ 0.25
PTPRU-202ENST00000373779 GCGRP47871 477 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 TMEM151AQ8N4L1 468 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 METTL2AQ96IZ6 378 aaKnown RBP16.61■□□□□ 0.25
PTPRU-202ENST00000373779 VEGFDO43915 354 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 PIGAP37287 484 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 RPA4Q13156 261 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 C4orf46Q504U0 113 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 ENPP7Q6UWV6 458 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 NRROSQ86YC3 692 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 PROKR2Q8NFJ6 384 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 OR4E2Q8NGC2 313 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 HERVK_113Q902F9 699 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 GAL3ST1Q99999 423 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 XKR8Q9H6D3 395 aa16.61■□□□□ 0.25
PTPRU-202ENST00000373779 CNOT2Q9NZN8 540 aaKnown RBP16.61■□□□□ 0.25
PTPRU-202ENST00000373779 RGS9O75916 674 aaPredicted RBP16.6■□□□□ 0.25
PTPRU-202ENST00000373779 DRD2P14416 443 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 LCN1P31025 176 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 SLAMF1Q13291 335 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 FAM180BQ6P0A1 224 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 SLC7A5P1Q8MH63 180 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 CEP76Q8TAP6 659 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 OTUB2Q96DC9 234 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 STRCP1A6NGW2 1772 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 UNC119BA6NIH7 251 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 FAM155AB1AL88 458 aaPredicted RBP16.6■□□□□ 0.25
PTPRU-202ENST00000373779 ERP29P30040 261 aaKnown RBP16.6■□□□□ 0.25
PTPRU-202ENST00000373779 RC3H2Q9HBD1 1191 aaKnown RBP16.6■□□□□ 0.25
PTPRU-202ENST00000373779 BEX1Q9HBH7 125 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 TNFRSF12AQ9NP84 129 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 ZNF670-ZNF695F2Z2N8 137 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 PCDH17O14917 1159 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 TFPIP10646 304 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 TMEM107Q6UX40 140 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 KLHDC9Q8NEP7 349 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 ADAD1Q96M93 576 aaKnown RBP16.6■□□□□ 0.25
PTPRU-202ENST00000373779 TNFRSF10BO14763 440 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 SLC16A6O15403 523 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 COQ9O75208 318 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 GABARAPO95166 117 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 GSTT2P0CG29 244 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 GIMD1P0DJR0 217 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 ZNF81P51508 661 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 SUOXP51687 545 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 OR12D2P58182 307 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 SBSNQ6UWP8 590 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 CEACAM19Q7Z692 300 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 LKAAEAR1Q8TD35 194 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 SORCS1Q8WY21 1168 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 ACOT12Q8WYK0 555 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 PPP1R14AQ96A00 147 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 PIGUQ9H490 435 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 RANBP3Q9H6Z4 567 aaPredicted RBP16.6■□□□□ 0.25
PTPRU-202ENST00000373779 DMRT3Q9NQL9 472 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 NLKQ9UBE8 527 aa16.6■□□□□ 0.25
PTPRU-202ENST00000373779 ANXA3P12429 323 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 TACR1P25103 407 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 PRMT2P55345 433 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 ADAM8P78325 824 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 PIAS4Q8N2W9 510 aaPredicted RBP16.59■□□□□ 0.25
PTPRU-202ENST00000373779 RNF175Q8N4F7 328 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 UBTD2Q8WUN7 234 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 ASB11Q8WXH4 323 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 MS4A4AQ96JQ5 239 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 TTTY10Q9BZA0 68 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 IL37Q9NZH6 218 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 L7N2F9 121 aa16.59■□□□□ 0.25
PTPRU-202ENST00000373779 WNT4P56705 351 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms