RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 OR4K1Q8NGD4 311 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 ACTL8Q9H568 366 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 DHX33Q9H6R0 707 aaKnown RBP15.75■□□□□ 0.11
PTCH1-201ENST00000331920 SLC2A8Q9NY64 477 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 CLIC3O95833 236 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 PRKCIP41743 596 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 NT5DC1Q5TFE4 455 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF705AQ6ZN79 300 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-201ENST00000331920 LINC00471Q8N535 108 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 PKP2Q99959 881 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 GINS3Q9BRX5 216 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 SMIM3Q9BZL3 60 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 PRTFDC1Q9NRG1 225 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 MEIS2O14770 477 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 RAB11BQ15907 218 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 SIRPB2Q5JXA9 342 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 LYSMD3Q7Z3D4 306 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 SCAMP5Q8TAC9 235 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 PAQR8Q8TEZ7 354 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF286AQ9HBT8 521 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 ARHGAP19Q14CB8 494 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 RPS27LQ71UM5 84 aaKnown RBP15.74■□□□□ 0.11
PTCH1-201ENST00000331920 TPRA1Q86W33 373 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 UNC13BO14795 1591 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 SEC14L6B5MCN3 397 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 LOC730098B7Z3J9 87 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 CST3P01034 146 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-201ENST00000331920 HEPHL1Q6MZM0 1159 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 GOLGA7Q7Z5G4 137 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 CCDC71LQ8N9Z2 235 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 HS6ST2Q96MM7 605 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 MED16Q9Y2X0 877 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 SLC15A5A6NIM6 579 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 TBX18O95935 607 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 NDUFV2P19404 249 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 PREPP48147 710 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 INHBEP58166 350 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 TRIM61Q5EBN2 209 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 PLEKHG7Q6ZR37 379 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 Q6ZVU0 165 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 MITD1Q8WV92 249 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 CLDN7O95471 211 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 RETP07949 1114 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 NDUFS1P28331 727 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 FBXW12Q6X9E4 464 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 DNAJB8Q8NHS0 232 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 ALG3Q92685 438 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 NUSAP1Q9BXS6 441 aaKnown RBP15.74■□□□□ 0.11
PTCH1-201ENST00000331920 POTEKPQ9BYX7 375 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 NEXMIFQ5QGS0 1516 aa15.74■□□□□ 0.11
PTCH1-201ENST00000331920 YBEYP58557 167 aaPredicted RBP15.73■□□□□ 0.11
PTCH1-201ENST00000331920 TSPAN10Q9H1Z9 355 aaPredicted RBP15.73■□□□□ 0.11
PTCH1-201ENST00000331920 DERAQ9Y315 318 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 CEP152O94986 1710 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 PLA2R1Q13018 1463 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 HNF4GQ14541 408 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 TRAM2Q15035 370 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 FAM182AQ5T1J6 154 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 USP51Q70EK9 711 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 CMTM1Q8IZ96 169 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 FAM160A2Q8N612 972 aaPredicted RBP15.73■□□□□ 0.11
PTCH1-201ENST00000331920 OR2T33Q8NG76 320 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 CNIH3Q8TBE1 160 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 FAM46BQ96A09 425 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 MCHR1Q99705 422 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 WDR6Q9NNW5 1121 aaKnown RBP15.73■□□□□ 0.11
PTCH1-201ENST00000331920 RNF11Q9Y3C5 154 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 SAMD9LQ8IVG5 1584 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 LMO2P25791 158 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 GPR4P46093 362 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 NRIP1P48552 1158 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 CLEC4CQ8WTT0 213 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF419Q96HQ0 510 aaPredicted RBP15.73■□□□□ 0.11
PTCH1-201ENST00000331920 SHDQ96IW2 340 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 SMIM35A0A1B0GVV1 85 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 SLC7A4O43246 635 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 SQSTM1Q13501 440 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 TMEM107Q6UX40 140 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 PDSS2Q86YH6 399 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 TERB2Q8NHR7 220 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 IKZF4Q9H2S9 585 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 PLEKHJ1Q9NW61 149 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 ZDHHC2Q9UIJ5 367 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 A2ML1A8K2U0 1454 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 FAM221BA6H8Z2 402 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 SC5DO75845 299 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 CDK1P06493 297 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 DCNP07585 359 aaKnown RBP15.73■□□□□ 0.11
PTCH1-201ENST00000331920 HOXB2P14652 356 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 GABRR1P24046 479 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 RPS24P62847 133 aaKnown RBP15.73■□□□□ 0.11
PTCH1-201ENST00000331920 PTPRRQ15256 657 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 HIST2H3PS2Q5TEC6 136 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 KIAA0895LQ68EN5 471 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 OR4K15Q8NH41 348 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 SLC5A11Q8WWX8 675 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 PTCHD1Q96NR3 888 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 FBXW11Q9UKB1 542 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 EIF4EP06730 217 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms