RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 PDHA2P29803 388 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 KEAP1Q14145 624 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 PNCKQ6P2M8 343 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 PJA1Q8NG27 643 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 FAM210AQ96ND0 272 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 NKX2-4Q9H2Z4 354 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 FKBP7Q9Y680 259 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 PIAS3Q9Y6X2 628 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.94■□□□□ 0.14
PHRF1-201ENST00000264555 DCKP27707 260 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 HTRA3P83110 453 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 CDK3Q00526 305 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 TMEM236Q5W0B7 351 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 LKAAEAR1Q8TD35 194 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 FGF13Q92913 245 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 ZBP1Q9H171 429 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 DSN1Q9H410 356 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 SLAMF8Q9P0V8 285 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 PGFP49763 221 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 GK3PQ14409 553 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 WDR45BQ5MNZ6 344 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 DENND6BQ8NEG7 585 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 PLEKHA1Q9HB21 404 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 PCDHA9Q9Y5H5 950 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 UNC119BA6NIH7 251 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 SOBPA7XYQ1 873 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 AGXTP21549 392 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 ACVR1Q04771 509 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 PROX2Q3B8N5 592 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 SBSNQ6UWP8 590 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 MFSD6LQ8IWD5 586 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 DEFB119Q8N690 84 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 RNASE11Q8TAA1 199 aaKnown RBP15.93■□□□□ 0.14
PHRF1-201ENST00000264555 BARD1Q99728 777 aaKnown RBP15.93■□□□□ 0.14
PHRF1-201ENST00000264555 SARDHQ9UL12 918 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 A8MU76 341 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 SEMA3DO95025 777 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 APBB3O95704 486 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 RNH1P13489 461 aaKnown RBP15.93■□□□□ 0.14
PHRF1-201ENST00000264555 LBX1P52954 281 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 ZNF765Q7L2R6 523 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 C12orf40Q86WS4 652 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 RASGEF1AQ8N9B8 481 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 OR2AJ1Q8NGZ0 328 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 HCAR2Q8TDS4 363 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 OR8D2Q9GZM6 311 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 HIDE1A8MVS5 230 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 CKMT1AP12532 417 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 FIGLAQ6QHK4 219 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 DCP2Q8IU60 420 aaKnown RBP15.93■□□□□ 0.14
PHRF1-201ENST00000264555 CENPSQ8N2Z9 138 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 CHST4Q8NCG5 386 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 OR51G2Q8NGK0 314 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 GPR174Q9BXC1 333 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 GRXCR1A8MXD5 290 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 BLOC1S5-TXNDC5H3BN57 136 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 ITIH1P19827 911 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 MLLT10P55197 1068 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 CDK5R2Q13319 367 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 SH2D5Q6ZV89 423 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 METTL25Q8N6Q8 603 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 EGLN2Q96KS0 407 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 RBCK1Q9BYM8 510 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 TRIM2Q9C040 744 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 ERVK-11Q9UQG0 969 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 TCEA1P23193 301 aaKnown RBP15.93■□□□□ 0.14
PHRF1-201ENST00000264555 SPHARQ15513 63 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 TCEAL5Q5H9L2 206 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 DNM1P34Q6PK57 102 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 FAM180AQ6UWF9 173 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 HMGN2P46Q86SG4 172 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 OR2T11Q8NH01 316 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 JSRP1Q96MG2 331 aaPredicted RBP15.93■□□□□ 0.14
PHRF1-201ENST00000264555 HS6ST2Q96MM7 605 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 APOOQ9BUR5 198 aa15.93■□□□□ 0.14
PHRF1-201ENST00000264555 MRPS14O60783 128 aaKnown RBP15.92■□□□□ 0.14
PHRF1-201ENST00000264555 GP1BBP13224 206 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 C1orf61Q13536 156 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 TMEM207Q6UWW9 146 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 RSPO2Q6UXX9 243 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-201ENST00000264555 Q6ZSR9 355 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 ZNF300Q96RE9 604 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-201ENST00000264555 C5AR2Q9P296 337 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 HCFC2Q9Y5Z7 792 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 CDK5RAP2Q96SN8 1893 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 IGLV3-27P01718 113 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 ZDHHC11BP0C7U3 371 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 TNFRSF1BP20333 461 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 ADAM15Q13444 863 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 GALNT12Q8IXK2 581 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 YIPF7Q8N8F6 280 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 ACTRT3Q9BYD9 372 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 PRAMEF33A0A0G2JMD5 474 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 PROM1O43490 865 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 CACNG3O60359 315 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 PRAMEF10O60809 474 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 JUNDP17535 347 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 SLC6A11P48066 632 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 SLC22A15Q8IZD6 547 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 LRR1Q96L50 414 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms