RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	RTP3	Q9BQQ7	232 aa		5.14	□□□□□ -1.59
NRXN1-223	ENST00000625891	PELI2	Q9HAT8	420 aa		5.14	□□□□□ -1.59
NRXN1-223	ENST00000625891	SYTL2	Q9HCH5	934 aa		5.14	□□□□□ -1.59
NRXN1-223	ENST00000625891	CHST11	Q9NPF2	352 aa		5.14	□□□□□ -1.59
NRXN1-223	ENST00000625891	FGF21	Q9NSA1	209 aa		5.14	□□□□□ -1.59
NRXN1-223	ENST00000625891	TMCC3	Q9ULS5	477 aa		5.14	□□□□□ -1.59
NRXN1-223	ENST00000625891	FOXA2	Q9Y261	457 aa	Predicted RBP	5.14	□□□□□ -1.59
NRXN1-223	ENST00000625891	HBS1L	Q9Y450	684 aa	Known RBP	5.14	□□□□□ -1.59
NRXN1-223	ENST00000625891	TRAV18	A0A075B6X5	111 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891		A0A087X0K7	114 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	C5orf51	A6NDU8	294 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	C2orf81	A6NN90	581 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	RASGRF2	O14827	1237 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	SSX5	O60225	188 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	PRKRA	O75569	313 aa	Known RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	TRIM16	O95361	564 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	PIGN	O95427	931 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	SERPING1	P05155	500 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	LGALS2	P05162	132 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	SP9	P0CG40	484 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	SMIM10L2A	P0DMW4	78 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	SMIM10L2B	P0DMW5	78 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	CCNA2	P20248	432 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	ELAVL4	P26378	380 aa	Known RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	CETN2	P41208	172 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	NR2C2	P49116	596 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	HTD2	P86397	168 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	UBE2S	Q16763	222 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	EPC2	Q52LR7	807 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	CELF3	Q5SZQ8	465 aa	Known RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	MARCH8	Q5T0T0	291 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	ARHGEF16	Q5VV41	709 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	CORO6	Q6QEF8	472 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	MFSD7	Q6UXD7	560 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	MEX3B	Q6ZN04	569 aa	Known RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	RBM43	Q6ZSC3	357 aa	Known RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	MARK2	Q7KZI7	788 aa	Known RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	SERINC5	Q86VE9	423 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	NR2C2AP	Q86WQ0	139 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	TMEM126B	Q8IUX1	230 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	PLD3	Q8IV08	490 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	HSCB	Q8IWL3	235 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	CDK20	Q8IZL9	346 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	KDM8	Q8N371	416 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	PRSS35	Q8N3Z0	413 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	VN1R2	Q8NFZ6	395 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	OR1J1	Q8NGS3	322 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	FAM122A	Q96E09	287 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZNF560	Q96MR9	790 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	URM1	Q9BTM9	101 aa	Known RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	LRRC2	Q9BYS8	371 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	TMEM245	Q9H330	911 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	TFB2M	Q9H5Q4	396 aa	Known RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZBTB20	Q9HC78	741 aa	Predicted RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	TAS2R3	Q9NYW6	316 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	UBQLN2	Q9UHD9	624 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	NOCT	Q9UK39	431 aa	Known RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	KLK4	Q9Y5K2	254 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	ABCB11	O95342	1321 aa		5.13	□□□□□ -1.59
NRXN1-223	ENST00000625891	GSTTP1	A0A1W2PQM5	241 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	FAM172BP	A6NC97	362 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	ARHGAP42	A6NI28	874 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	PRSS46	E5RG02	174 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZNF432	O94892	652 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	PDGFB	P01127	241 aa	Predicted RBP	5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	SLC4A1	P02730	911 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	APOH	P02749	345 aa	Predicted RBP	5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	ATP1A1	P05023	1023 aa	Known RBP	5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	GHR	P10912	638 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	GP1BB	P13224	206 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	CPA3	P15088	417 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	AREG	P15514	252 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZNF18	P17022	549 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	MSH3	P20585	1137 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	SFTPD	P35247	375 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	RFC2	P35250	354 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	MAGEB1	P43366	347 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	OR3A1	P47881	315 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	OR3A3	P47888	321 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZNF131	P52739	623 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	DVL1P1	P54792	670 aa	Predicted RBP	5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	MAZ	P56270	477 aa	Known RBP	5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	MGAT3	Q09327	533 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	LCP2	Q13094	533 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	GPM6B	Q13491	265 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	TRA2A	Q13595	282 aa	Known RBP eCLIP	5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	PDE7A	Q13946	482 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	CCDC40	Q4G0X9	1142 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	HSP90AA5P	Q58FG0	334 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	TMEM31	Q5JXX7	168 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	SPDYC	Q5MJ68	293 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	ABRAXAS1	Q6UWZ7	409 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	CNPY4	Q8N129	248 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	PRSS33	Q8NF86	280 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	OR2T12	Q8NG77	320 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	OR11H4	Q8NGC9	324 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	PHOSPHO2	Q8TCD6	241 aa		5.12	□□□□□ -1.59
NRXN1-223	ENST00000625891	TGS1	Q96RS0	853 aa	Known RBP	5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms