RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PRG2P13727 222 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 GP9P14770 177 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 C4BPBP20851 252 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 BACE1P56817 501 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 CSNK2BP67870 215 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 MECOMQ03112 1051 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 ARL16Q0P5N6 197 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 EFTUD2Q15029 972 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC00397-202ENST00000606785 TEAD2Q15562 447 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 TAB1Q15750 504 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 TMEM41BQ5BJD5 291 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 ARHGAP17Q68EM7 881 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 SULT1C3Q6IMI6 304 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
LINC00397-202ENST00000606785 CCBE1Q6UXH8 406 aaPredicted RBP4.45□□□□□ -1.7
LINC00397-202ENST00000606785 RGS9BPQ6ZS82 235 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 ZER1Q7Z7L7 766 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 LACC1Q8IV20 430 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 WDR49Q8IV35 697 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 SLC22A15Q8IZD6 547 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 OR5AP2Q8NGF4 316 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 OR4D10Q8NGI6 311 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 SCARB1Q8WTV0 552 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 PAPOLGQ9BWT3 736 aaKnown RBP4.45□□□□□ -1.7
LINC00397-202ENST00000606785 FAM124BQ9H5Z6 455 aaPredicted RBP4.45□□□□□ -1.7
LINC00397-202ENST00000606785 PALMDQ9NP74 551 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 GDF3Q9NR23 364 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 MED17Q9NVC6 651 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 ZNHIT6Q9NWK9 470 aaKnown RBP4.45□□□□□ -1.7
LINC00397-202ENST00000606785 GTSE1Q9NYZ3 720 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 LHX3Q9UBR4 397 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 BCAP29Q9UHQ4 241 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 PLCL2Q9UPR0 1127 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 N6AMT1Q9Y5N5 214 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.45□□□□□ -1.7
LINC00397-202ENST00000606785 RAD50Q92878 1312 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 STK36Q9NRP7 1315 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 A0A1B0GUL7 405 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 FAM172BPA6NC97 362 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 TRIM49BA6NDI0 452 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 SHISA7A6NL88 538 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 GPR89AB7ZAQ6 455 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 ANHXE9PGG2 379 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 P2RY10O00398 339 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 E2F3O00716 465 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 PDXKO00764 312 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 MCF2LO15068 1137 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 TLX2O43763 284 aaPredicted RBP4.44□□□□□ -1.7
LINC00397-202ENST00000606785 CSO75390 466 aaKnown RBP4.44□□□□□ -1.7
LINC00397-202ENST00000606785 KHDRBS3O75525 346 aaKnown RBP4.44□□□□□ -1.7
LINC00397-202ENST00000606785 CSDE1O75534 798 aaKnown RBP4.44□□□□□ -1.7
LINC00397-202ENST00000606785 MTRF1O75570 445 aaKnown RBP4.44□□□□□ -1.7
LINC00397-202ENST00000606785 AP2A2O94973 939 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 LYNP07948 512 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 GPR89BP0CG08 455 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 ERVK-10P10266 1014 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 TNNI3P19429 210 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 CCNCP24863 283 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 GIFP27352 417 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 TMOD1P28289 359 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 FHITP49789 147 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 XGP55808 180 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 GUCY2DQ02846 1103 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 ZSWIM7Q19AV6 140 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 ADPRMQ3LIE5 342 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 C1orf189Q5VU69 101 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 TRIM65Q6PJ69 517 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 CENPLQ8N0S6 344 aaPredicted RBP4.44□□□□□ -1.7
LINC00397-202ENST00000606785 FADS6Q8N9I5 356 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 OR5T2Q8NGG2 359 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 OR10T2Q8NGX3 314 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 TMEM37Q8WXS4 190 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 DEFB118Q96PH6 123 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 RAB40CQ96S21 281 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 WRAP53Q9BUR4 548 aaKnown RBP4.44□□□□□ -1.7
LINC00397-202ENST00000606785 VPS33BQ9H267 617 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF334Q9HCZ1 680 aaPredicted RBP4.44□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF71Q9NQZ8 489 aaPredicted RBP4.44□□□□□ -1.7
LINC00397-202ENST00000606785 CFAP45Q9UL16 551 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF490Q9ULM2 529 aaPredicted RBP4.44□□□□□ -1.7
LINC00397-202ENST00000606785 PTPRUQ92729 1446 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 KIF7Q2M1P5 1343 aa4.44□□□□□ -1.7
LINC00397-202ENST00000606785 CLRN2A0PK11 232 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 SURF4O15260 269 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 MAPK13O15264 365 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 SIGLEC5O15389 551 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 GMFGO60234 142 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 KIAA0513O60268 411 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 ANGPTL1O95841 491 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 CALCAP01258 141 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 PRSS1P07477 247 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 SNHG28P0DPA3 235 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 EPB41P11171 864 aaKnown RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 PAICSP22234 425 aaKnown RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 HNRNPA2B1P22626 353 aaKnown RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 PSMA5P28066 241 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 PTPN4P29074 926 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 FCGR2BP31994 310 aaPredicted RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 ADRA1AP35348 466 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 LEPRP48357 1165 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms