RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	MYOT	Q9UBF9	498 aa		12.53	□□□□□ -0.4
ARHGEF1-222	ENST00000600517	VPS29	Q9UBQ0	182 aa		12.53	□□□□□ -0.4
ARHGEF1-222	ENST00000600517	YARS2	Q9Y2Z4	477 aa	Known RBP	12.53	□□□□□ -0.4
ARHGEF1-222	ENST00000600517	PLLP	Q9Y342	182 aa		12.53	□□□□□ -0.4
ARHGEF1-222	ENST00000600517	ITGA10	O75578	1167 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	CRYAB	P02511	175 aa	Known RBP	12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	IGKV3-11	P04433	115 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	TUBB	P07437	444 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SLC35E2	P0CK97	266 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	CHN1	P15882	459 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	GALNS	P34059	522 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	HTR6	P50406	440 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	MAPK12	P53778	367 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	TRA2B	P62995	288 aa	Known RBP	12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	RNF4	P78317	190 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	PLIN5	Q00G26	463 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	CFAP157	Q5JU67	520 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	NDUFAF5	Q5TEU4	345 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	OR52E8	Q6IFG1	317 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	DGAT2L6	Q6ZPD8	337 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	FRMD7	Q6ZUT3	714 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	C1orf52	Q8N6N3	182 aa	Known RBP	12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	CCDC63	Q8NA47	563 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	TMEM178A	Q8NBL3	297 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	OR5L2	Q8NGL0	311 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	NR4A3	Q92570	626 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	TM4SF18	Q96CE8	201 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	FBXL20	Q96IG2	436 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	APOPT1	Q96IL0	206 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	C5orf34	Q96MH7	638 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	KCNA7	Q96RP8	456 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	HBEGF	Q99075	208 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	HES7	Q9BYE0	225 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	MID2	Q9UJV3	735 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	CES1P1	Q9UKY3	287 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	TIMM22	Q9Y584	194 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	PCDHA9	Q9Y5H5	950 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	CPAMD8	Q8IZJ3	1885 aa		12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	USP9Y	O00507	2555 aa	Predicted RBP	12.52	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	ASPDH	A6ND91	283 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	DYRK3	O43781	588 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SLC25A12	O75746	678 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SSR4	P51571	173 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	TDGF1P3	P51864	188 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	FOXA1	P55317	472 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	ELOA	Q14241	798 aa	Known RBP	12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	PCLAF	Q15004	111 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SPRED3	Q2MJR0	410 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	FHL5	Q5TD97	284 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	LIPM	Q5VYY2	423 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	GALNTL5	Q7Z4T8	443 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	C10orf107	Q8IVU9	208 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SRRM1	Q8IYB3	904 aa	Known RBP	12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	TMEM156	Q8N614	296 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	OR4K14	Q8NGD5	310 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	PRR7	Q8TB68	274 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	C11orf24	Q96F05	449 aa	Predicted RBP	12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	ART5	Q96L15	291 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	ACPT	Q9BZG2	426 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	KLHL1	Q9NR64	748 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SIRT5	Q9NXA8	310 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	COPS7A	Q9UBW8	275 aa		12.51	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	POLE	Q07864	2286 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	PTPN13	Q12923	2485 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	C1orf226	A1L170	272 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	HRK	O00198	91 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	WWP2	O00308	870 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	NME2P1	O60361	137 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	OR10H2	O60403	315 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	TRIM13	O60858	407 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SEMA7A	O75326	666 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	OR2J2	O76002	312 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	NME2	P22392	152 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	MST1	P26927	711 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	PIK3R1	P27986	724 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	XK	P51811	444 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	HK2	P52789	917 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	MAPKAPK3	Q16644	382 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SLC48A1	Q6P1K1	146 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	GALNT18	Q6P9A2	607 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	GPALPP1	Q8IXQ4	340 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	RIT1	Q92963	219 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	TMEM125	Q96AQ2	219 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	RASL10B	Q96S79	203 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	TRMO	Q9BU70	441 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	GATA5	Q9BWX5	397 aa	Predicted RBP	12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	IQCG	Q9H095	443 aa	Known RBP	12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	LIN28A	Q9H9Z2	209 aa	Known RBP	12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	CXorf21	Q9HAI6	301 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	MCM8	Q9UJA3	840 aa		12.5	□□□□□ -0.41
ARHGEF1-222	ENST00000600517		A0A1W2PS29	197 aa		12.49	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	UROS	P10746	265 aa		12.49	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	CPM	P14384	443 aa		12.49	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SERPINB3	P29508	390 aa		12.49	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	SLC37A1	P57057	533 aa		12.49	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	RAE1	P78406	368 aa	Known RBP	12.49	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	PMP22	Q01453	160 aa		12.49	□□□□□ -0.41
ARHGEF1-222	ENST00000600517	HMGCS1	Q01581	520 aa		12.49	□□□□□ -0.41

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