RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SLC9B1P1A6NJY1 282 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 E7EQ34 232 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 H0YIV9 168 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 TXNDC9O14530 226 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 OR7A17O14581 309 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 KIF1CO43896 1103 aaKnown RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 SRPX2O60687 465 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 SNNO75324 88 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 RASSF9O75901 435 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 SUPT7LO94864 414 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PRSS23O95084 383 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 SPDEFO95238 335 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 KCNK5O95279 499 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 ELANEP08246 267 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 FGF4P08620 206 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 FGF3P11487 239 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 NEFHP12036 1026 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 CDH1P12830 882 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 CHN1P15882 459 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 DDCP20711 480 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 MAGP20916 626 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PSMB5P28074 263 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 AHRP35869 848 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PIK3CBP42338 1070 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PPM1FP49593 454 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 CCNG1P51959 295 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 GFERP55789 205 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PPP1CAP62136 330 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 RPS15AP62244 130 aaKnown RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 CSNK1G2P78368 415 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 REEP5Q00765 189 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 IRF8Q02556 426 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 TRAF3Q13114 568 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 CHIT1Q13231 466 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 STX3Q13277 289 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 TP53BP2Q13625 1128 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 TSTA3Q13630 321 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 DOC2AQ14183 400 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 IL11RAQ14626 422 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 CHI3L2Q15782 390 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 HIST2H2ACQ16777 129 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 ISXQ2M1V0 245 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 C18orf21Q32NC0 220 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 TUBB8Q3ZCM7 444 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 UNC50Q53HI1 259 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 XKR6Q5GH73 641 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 ARL13AQ5H913 290 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 MANEAQ5SRI9 462 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 TMTC4Q5T4D3 741 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 CACHD1Q5VU97 1274 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 KIAA1614Q5VZ46 1190 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 HIST2H2AA3Q6FI13 130 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 GRHL2Q6ISB3 625 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 FIGLAQ6QHK4 219 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 TMIGD1Q6UXZ0 262 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 Q6YL49 198 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 RNF165Q6ZSG1 346 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 FAM92BQ6ZTR7 304 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 GPRIN3Q6ZVF9 776 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 RNF44Q7L0R7 432 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 LAS2Q8IYD9 372 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 GALNT15Q8N3T1 639 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 C2orf73Q8N5S3 287 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 MGARPQ8TDB4 240 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 DYDC1Q8WWB3 177 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 ADAMTS14Q8WXS8 1223 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 ZBTB9Q96C00 473 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 FAR2Q96K12 515 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF285Q96NJ3 590 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 NRTNQ99748 197 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 MAP3K3Q99759 626 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 CCT7Q99832 543 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PAIP2Q9BPZ3 127 aaKnown RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 MECRQ9BV79 373 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 ACAT2Q9BWD1 397 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 B3GNT4Q9C0J1 378 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 RHBGQ9H310 441 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 CCDC134Q9H6E4 229 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 NOL11Q9H8H0 719 aaKnown RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 MANSC1Q9H8J5 431 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 ZBTB26Q9HCK0 441 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 SEMA4BQ9NPR2 832 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PFDN4Q9NQP4 134 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 GEMIN8Q9NWZ8 242 aaKnown RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PSD3Q9NYI0 1048 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 HAO1Q9UJM8 370 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PILRAQ9UKJ1 303 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PLCL2Q9UPR0 1127 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PCDHGA9Q9Y5G4 932 aaKnown RBP5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PCDHGA8Q9Y5G5 932 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PCDHGA7Q9Y5G6 932 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PCDHGA6Q9Y5G7 932 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 PCDHGA3Q9Y5H0 932 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 CEP250Q9BV73 2442 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 LRRC14BA6NHZ5 514 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 B4E171 279 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 SLCO1B7G3V0H7 640 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 FOXE1O00358 373 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 UBFD1O14562 309 aaKnown RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 CTSVO60911 334 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms