RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ZNF615Q8N8J6 731 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 CCDC71LQ8N9Z2 235 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 RELL2Q8NC24 303 aaPredicted RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 NAXEQ8NCW5 288 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 OR1K1Q8NGR3 316 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 OR13C5Q8NGS8 318 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 BPIFA2Q96DR5 249 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 PLEKHF1Q96S99 279 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 RIOK1Q9BRS2 568 aaKnown RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 ZNF2Q9BSG1 426 aaPredicted RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 MRPL1Q9BYD6 325 aaKnown RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 NMNAT2Q9BZQ4 307 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 ELOVL4Q9GZR5 314 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 MED17Q9NVC6 651 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 PPIEQ9UNP9 301 aaKnown RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 RUVBL2Q9Y230 463 aaKnown RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 WIF1Q9Y5W5 379 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 MUC6Q6W4X9 2439 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 EDDM13A0A1B0GTR0 161 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 C2orf92A0A1B0GVN3 265 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 LRRD1A4D1F6 860 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 PGPEP1LA6NFU8 196 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 ZSCAN5BA6NJL1 495 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 USP27XA6NNY8 438 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 WWP2O00308 870 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 OR7A17O14581 309 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 NBR2O15453 112 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 B4GAT1O43505 415 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 PLOD3O60568 738 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 PTP4A3O75365 173 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 CBR3O75828 277 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 CALCAP01258 141 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 MMP10P09238 476 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 OR52Z1P0C646 297 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 KRT3P12035 628 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 CD99P14209 185 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 PVRP15151 417 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 IGFBP3P17936 291 aaPredicted RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 ERCC2P18074 760 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 ADRA2CP18825 462 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 LONP1P36776 959 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 ACVR1BP36896 505 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 DAZ2Q13117 558 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 RPS6KA1Q15418 735 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 ZRSR2Q15696 482 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 KRTAP6-3Q3LI67 103 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 GLYR1Q49A26 553 aaPredicted RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 DUSP28Q4G0W2 176 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 IQCCQ4KMZ1 466 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 KRTAP13-2Q52LG2 175 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 SBK1Q52WX2 424 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 WDR25Q64LD2 544 aaPredicted RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 ALKBH5Q6P6C2 394 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 MOXD1Q6UVY6 613 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 ENPP7Q6UWV6 458 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 ZNF730Q6ZMV8 503 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 TRPM8Q7Z2W7 1104 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 NRARPQ7Z6K4 114 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 CACUL1Q86Y37 369 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 LINC00346Q8IVM7 164 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 GPR65Q8IYL9 337 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 MYOCDQ8IZQ8 938 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 ICA1LQ8NDH6 482 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 MDS2Q8NDY4 140 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 BBS1Q8NFJ9 593 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 NEIL3Q8TAT5 605 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 BLOC1S5Q8TDH9 187 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 ANKRD49Q8WVL7 239 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 TEKT4Q8WW24 435 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 ZCCHC13Q8WW36 166 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 TCP11Q8WWU5 503 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 PRPF31Q8WWY3 499 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 FAM120BQ96EK7 910 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 DHTKD1Q96HY7 919 aaPredicted RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 C9orf85Q96MD7 179 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 GUCD1Q96NT3 240 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 LRRC3BQ96PB8 259 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 SPIN2AQ99865 258 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 SPIN2BQ9BPZ2 258 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 NICN1Q9BSH3 213 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 CCM2Q9BSQ5 444 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 CCDC106Q9BWC9 280 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 APOL6Q9BWW8 343 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 GTPBP2Q9BX10 602 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 WWP1Q9H0M0 922 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 MTIF3Q9H2K0 278 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 Q9H3A6 140 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 UNC45AQ9H3U1 944 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 GLIPR2Q9H4G4 154 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 C5orf66Q9H5L9 145 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 VIPAS39Q9H9C1 493 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 S100A14Q9HCY8 104 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 DAZ3Q9NR90 486 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 TAS2R16Q9NYV7 291 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 C9orf78Q9NZ63 289 aaPredicted RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 EIF3KQ9UBQ5 218 aaKnown RBP0.28□□□□□ -2.36
COPB1-212ENST00000534771 SEC14L4Q9UDX3 406 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 CIDEBQ9UHD4 219 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 PGAP2Q9UHJ9 254 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 PRG3Q9Y2Y8 225 aaPredicted RBP0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 600.7 ms