RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 M1APQ8TC57 530 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 PTPMT1Q8WUK0 201 aaPredicted RBP11.97□□□□□ -0.49
VEGFA-224ENST00000523873 GFM2Q969S9 779 aaKnown RBP11.97□□□□□ -0.49
VEGFA-224ENST00000523873 TUBGCP3Q96CW5 907 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 C19orf60Q96EN9 201 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 EGLN2Q96KS0 407 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 SMAD5Q99717 465 aaKnown RBP11.97□□□□□ -0.49
VEGFA-224ENST00000523873 NPAS2Q99743 824 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 C1orf50Q9BV19 199 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 FAIM2Q9BWQ8 316 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 NUF2Q9BZD4 464 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 OR8D2Q9GZM6 311 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 MMP25Q9NPA2 562 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 THAP1Q9NVV9 213 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 HAO1Q9UJM8 370 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 CES1P1Q9UKY3 287 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 EXO1Q9UQ84 846 aaKnown RBP11.97□□□□□ -0.49
VEGFA-224ENST00000523873 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.97□□□□□ -0.49
VEGFA-224ENST00000523873 CSAG2Q9Y5P2 127 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 COL6A6A6NMZ7 2263 aa11.97□□□□□ -0.49
VEGFA-224ENST00000523873 TRBV11-1A0A0K0K1C0 115 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 PRKNO60260 465 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-224ENST00000523873 OR10H2O60403 315 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 C1QL1O75973 258 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 LRATO95237 230 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 DDAH2O95865 285 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 ICAM2P13598 275 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 SDC1P18827 310 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 SOX11P35716 441 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 GPR143P51810 404 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 XKP51811 444 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 HK2P52789 917 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 OCRLQ01968 901 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 NADK2Q4G0N4 442 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 AGAP7PQ5VUJ5 663 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 ANKRD26P1Q6NSI1 321 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 CRLF3Q8IUI8 442 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 RBMXL3Q8N7X1 1067 aaKnown RBP11.96□□□□□ -0.49
VEGFA-224ENST00000523873 APCDD1LQ8NCL9 501 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 LSM14AQ8ND56 463 aaKnown RBP11.96□□□□□ -0.49
VEGFA-224ENST00000523873 OR4K14Q8NGD5 310 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 RAB3IL1Q8TBN0 382 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 ELP5Q8TE02 316 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 THAP3Q8WTV1 239 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-224ENST00000523873 DYDC1Q8WWB3 177 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 EXOSC8Q96B26 276 aaKnown RBP11.96□□□□□ -0.49
VEGFA-224ENST00000523873 KLHL29Q96CT2 875 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 FCRL1Q96LA6 429 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 PPP3R2Q96LZ3 170 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 AGAP4Q96P64 663 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 TSSK3Q96PN8 268 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 MFRPQ9BY79 579 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 INTS9Q9NV88 658 aaKnown RBP11.96□□□□□ -0.49
VEGFA-224ENST00000523873 PLA2G3Q9NZ20 509 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 LUZP4Q9P127 313 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 BAIAP2L1Q9UHR4 511 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 UTS2RQ9UKP6 389 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 G3BP2Q9UN86 482 aaKnown RBP11.96□□□□□ -0.49
VEGFA-224ENST00000523873 ZNF451Q9Y4E5 1061 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 CLCA3PQ9Y6N3 262 aa11.96□□□□□ -0.49
VEGFA-224ENST00000523873 FAM208BQ5VWN6 2430 aa11.96□□□□□ -0.5
VEGFA-224ENST00000523873 AKAP10O43572 662 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 CT62P0C5K7 136 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 SFTPCP11686 197 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 CPMP14384 443 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 NT5EP21589 574 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 ERVK-8P63133 956 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 PLIN5Q00G26 463 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 LTB4RQ15722 352 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 ATP6AP1LQ52LC2 224 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 CRB2Q5IJ48 1285 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 C6orf136Q5SQH8 315 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 FAM71E1Q6IPT2 247 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 ISLR2Q6UXK2 745 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 C16orf47Q6ZP98 133 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-224ENST00000523873 TICAM1Q8IUC6 712 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 ST13P4Q8IZP2 240 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-224ENST00000523873 TMEM132CQ8N3T6 1108 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 FNDC5Q8NAU1 212 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 OR14A16Q8NHC5 309 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 FAM76AQ8TAV0 307 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.95□□□□□ -0.52e-10■■■■■ 37.7
VEGFA-224ENST00000523873 SLC2A12Q8TD20 617 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 ZNF721Q8TF20 911 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 NUDT8Q8WV74 236 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 CNRIP1Q96F85 164 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-224ENST00000523873 VMP1Q96GC9 406 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 RBM18Q96H35 190 aaKnown RBP11.95□□□□□ -0.5
VEGFA-224ENST00000523873 CNPPD1Q9BV87 410 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 CDCP1Q9H5V8 836 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 AKTIPQ9H8T0 292 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 LIN28AQ9H9Z2 209 aaKnown RBP11.95□□□□□ -0.5
VEGFA-224ENST00000523873 MYNNQ9NPC7 610 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 SLCO1B3Q9NPD5 702 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 PFDN4Q9NQP4 134 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 ERVK-19Q9WJR5 959 aa11.95□□□□□ -0.5
VEGFA-224ENST00000523873 BSNQ9UPA5 3926 aa11.94□□□□□ -0.5
VEGFA-224ENST00000523873 ZFYVE26Q68DK2 2539 aa11.94□□□□□ -0.5
VEGFA-224ENST00000523873 ATMQ13315 3056 aa11.94□□□□□ -0.5
VEGFA-224ENST00000523873 ITPR1Q14643 2758 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms