RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ARFGAP2Q8N6H7 521 aa16.98■□□□□ 0.31
VEGFA-222ENST00000520948 DNAJB14Q8TBM8 379 aa16.98■□□□□ 0.31
VEGFA-222ENST00000520948 LRRC8CQ8TDW0 803 aa16.98■□□□□ 0.31
VEGFA-222ENST00000520948 C16orf78Q8WTQ4 265 aa16.98■□□□□ 0.31
VEGFA-222ENST00000520948 IMMP1LQ96LU5 166 aa16.98■□□□□ 0.31
VEGFA-222ENST00000520948 WDR77Q9BQA1 342 aaPredicted RBP16.98■□□□□ 0.31
VEGFA-222ENST00000520948 CES1P1Q9UKY3 287 aa16.98■□□□□ 0.31
VEGFA-222ENST00000520948 PCDHA9Q9Y5H5 950 aa16.98■□□□□ 0.31
VEGFA-222ENST00000520948 ATP6AP2A0A1C7CYW4 349 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 PEX12O00623 359 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 ZNF195O14628 629 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 PGRMC2O15173 223 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 LDB3O75112 727 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 GUCY1B2O75343 617 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 PRKRAO75569 313 aaKnown RBP16.97■□□□□ 0.31
VEGFA-222ENST00000520948 ATP6AP2O75787 350 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 ANXA4P09525 319 aaPredicted RBP16.97■□□□□ 0.31
VEGFA-222ENST00000520948 PRR35P0CG20 571 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 COL8A1P27658 744 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 HK2P52789 917 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 SOX8P57073 446 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 NR6A1Q15406 480 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 SMU1Q2TAY7 513 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 DCAF10Q5QP82 559 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 C6orf136Q5SQH8 315 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 NDUFAF7Q7L592 441 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 PIWIL2Q8TC59 973 aaKnown RBP16.97■□□□□ 0.31
VEGFA-222ENST00000520948 DYDC1Q8WWB3 177 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 PPP3R2Q96LZ3 170 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 SMAD5Q99717 465 aaKnown RBP16.97■□□□□ 0.31
VEGFA-222ENST00000520948 MEAF6Q9HAF1 191 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 SLCO1B3Q9NPD5 702 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 PFDN4Q9NQP4 134 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 DLGAP4Q9Y2H0 992 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 TMED5Q9Y3A6 229 aa16.97■□□□□ 0.31
VEGFA-222ENST00000520948 UNC79Q9P2D8 2635 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 C1orf226A1L170 272 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 MASP2O00187 686 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 FGF17O60258 216 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 PEX11AO75192 247 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 HPP00738 406 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 NR2F6P10588 404 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 TAS2R50P59544 299 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 SLC13A2Q13183 592 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 BIKQ13323 160 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 PDCD2Q16342 344 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-222ENST00000520948 PLEKHN1Q494U1 663 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-222ENST00000520948 SFT2D3Q587I9 215 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 ZNF787Q6DD87 383 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 HPS6Q86YV9 775 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 WDR75Q8IWA0 830 aaKnown RBP16.96■□□□□ 0.31
VEGFA-222ENST00000520948 C7orf57Q8NEG2 295 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 VPS50Q96JG6 964 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 FER1L6-AS2Q96M78 137 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 ALOXE3Q9BYJ1 711 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 RIC8BQ9NVN3 520 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 HEY2Q9UBP5 337 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 VTI1BQ9UEU0 232 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 C19orf25Q9UFG5 118 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-222ENST00000520948 GIMAP2Q9UG22 337 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 FBXL4Q9UKA2 621 aa16.96■□□□□ 0.31
VEGFA-222ENST00000520948 EXO1Q9UQ84 846 aaKnown RBP16.96■□□□□ 0.31
VEGFA-222ENST00000520948 WBP11Q9Y2W2 641 aaKnown RBP16.96■□□□□ 0.31
VEGFA-222ENST00000520948 POLR3HQ9Y535 204 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-222ENST00000520948 HIVEP3Q5T1R4 2406 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 IGHV3-20A0A0C4DH32 117 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 GNG14A0A1W2PPG7 69 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 SYNDIG1LA6NDD5 238 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 GLOD5A6NK44 160 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 SLCO1B7G3V0H7 640 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 HDAC3O15379 428 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 MYO1DO94832 1006 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 GPR75O95800 540 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 DRD2P14416 443 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 TACR1P25103 407 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 OR4D2P58180 307 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 FOLH1Q04609 750 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 EEF1A2Q05639 463 aaKnown RBP16.95■□□□□ 0.3
VEGFA-222ENST00000520948 ZNF763Q0D2J5 394 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 Q0VFX4 171 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 SERTAD2Q14140 314 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 GALNTL6Q49A17 601 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 VWA5B1Q5TIE3 1220 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 FAM71E1Q6IPT2 247 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 SLC48A1Q6P1K1 146 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 RIPOR1Q6ZS17 1223 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 LARP4Q71RC2 724 aaKnown RBP eCLIP16.95■□□□□ 0.31e-25■□□□□ 10.3
VEGFA-222ENST00000520948 CLNKQ7Z7G1 428 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 OR4N5Q8IXE1 308 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 LRRC34Q8IZ02 419 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 MMP21Q8N119 569 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 CISD2Q8N5K1 135 aaKnown RBP16.95■□□□□ 0.3
VEGFA-222ENST00000520948 AMER2Q8N7J2 671 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 NFAM1Q8NET5 270 aaPredicted RBP16.95■□□□□ 0.3
VEGFA-222ENST00000520948 SNRNP40Q96DI7 357 aaKnown RBP16.95■□□□□ 0.3
VEGFA-222ENST00000520948 TUBB6Q9BUF5 446 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 EBPLQ9BY08 206 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 NUF2Q9BZD4 464 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 AKTIPQ9H8T0 292 aa16.95■□□□□ 0.3
VEGFA-222ENST00000520948 WDR41Q9HAD4 459 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms