RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 ATP4BP51164 291 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 GEMP55040 296 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 CASP9P55211 416 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 PEX3P56589 373 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 SLC8A3P57103 927 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 SSTP61278 116 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 RPL27P61353 136 aaKnown RBP1.88□□□□□ -2.11
RNF4-219ENST00000513450 RPS27AP62979 156 aaKnown RBP1.88□□□□□ -2.11
RNF4-219ENST00000513450 HERV-K104P63124 156 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 GFPT1Q06210 699 aaPredicted RBP1.88□□□□□ -2.11
RNF4-219ENST00000513450 AP1B1Q10567 949 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 PPP1R8Q12972 351 aaKnown RBP1.88□□□□□ -2.11
RNF4-219ENST00000513450 PPP2R5CQ13362 524 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 KRT31Q15323 416 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 P2RY14Q15391 338 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 SIX1Q15475 284 aaPredicted RBP1.88□□□□□ -2.11
RNF4-219ENST00000513450 TRADDQ15628 312 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 LPAL2Q16609 132 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 WSCD2Q2TBF2 565 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 KRTAP27-1Q3LI81 207 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 C9orf66Q5T8R8 295 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 NKAIN2Q5VXU1 208 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 HIST2H2AA3Q6FI13 130 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 RTL6Q6ICC9 239 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 DLEU7Q6UYE1 221 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 Q6ZRG5 221 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 NUFIP2Q7Z417 695 aaKnown RBP1.88□□□□□ -2.11
RNF4-219ENST00000513450 ITIH5Q86UX2 942 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 ZNF781Q8N8C0 355 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 CSNK1G2-AS1Q8NCQ2 148 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 ICA1LQ8NDH6 482 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 BEST4Q8NFU0 473 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 OR1K1Q8NGR3 316 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 OR4A16Q8NH70 328 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 MRPL24Q96A35 216 aaKnown RBP1.88□□□□□ -2.11
RNF4-219ENST00000513450 RAB39BQ96DA2 213 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 CDHR1Q96JP9 859 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 RPGRIP1Q96KN7 1286 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 ZNF560Q96MR9 790 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 GPR137Q96N19 417 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 RUNDC3BQ96NL0 473 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 HSD17B14Q9BPX1 270 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 SOSTQ9BQB4 213 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 DCTN5Q9BTE1 182 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 FUNDC2Q9BWH2 189 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 DPEP3Q9H4B8 488 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 NT5DC2Q9H857 520 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 GNB4Q9HAV0 340 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 KCNMB3Q9NPA1 279 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 IL19Q9UHD0 177 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 NARFQ9UHQ1 456 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 TRMT6Q9UJA5 497 aaKnown RBP1.88□□□□□ -2.11
RNF4-219ENST00000513450 TEX264Q9Y6I9 313 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 KIF26BQ2KJY2 2108 aa1.88□□□□□ -2.11
RNF4-219ENST00000513450 SPAG9O60271 1321 aaKnown RBP1.88□□□□□ -2.11
RNF4-219ENST00000513450 COL5A2P05997 1499 aaPredicted RBP1.88□□□□□ -2.11
RNF4-219ENST00000513450 KIAA1217Q5T5P2 1943 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 SYCE3A1L190 88 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 SH3PXD2BA1X283 911 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 MACROD2A1Z1Q3 448 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 ACOD1A6NK06 481 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 RNF212BA8MTL3 300 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 MEI4A8MW99 385 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 TLR4O00206 839 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 ZBTB14O43829 449 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 HSF2BPO75031 334 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 CALCAP01258 141 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 MT-ND3P03897 115 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 FCER2P06734 321 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 HOXD4P09016 255 aaPredicted RBP1.87□□□□□ -2.11
RNF4-219ENST00000513450 HIST1H2AGP0C0S8 130 aaPredicted RBP1.87□□□□□ -2.11
RNF4-219ENST00000513450 FOSL2P15408 326 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 STMN1P16949 149 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 SPRP35270 261 aaPredicted RBP1.87□□□□□ -2.11
RNF4-219ENST00000513450 PTGER3P43115 390 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 TNFRSF4P43489 277 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 ACADSBP45954 432 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 MTIF2P46199 727 aaKnown RBP1.87□□□□□ -2.11
RNF4-219ENST00000513450 CNN1P51911 297 aaKnown RBP1.87□□□□□ -2.11
RNF4-219ENST00000513450 NDST1P52848 882 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 LIMK2P53671 638 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 GALK2Q01415 458 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 ACY1Q03154 408 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 CD300CQ08708 224 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 EXOSC7Q15024 291 aaKnown RBP1.87□□□□□ -2.11
RNF4-219ENST00000513450 HAGHQ16775 308 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 SHROOM1Q2M3G4 852 aaPredicted RBP1.87□□□□□ -2.11
RNF4-219ENST00000513450 EPC2Q52LR7 807 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 HERC4Q5GLZ8 1057 aaPredicted RBP1.87□□□□□ -2.11
RNF4-219ENST00000513450 AGAP7PQ5VUJ5 663 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 LIPJQ5W064 366 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 RHBDD2Q6NTF9 364 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 CDC42EP5Q6NZY7 148 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 FBXL22Q6P050 247 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 PLBD1Q6P4A8 553 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 ZNF841Q6ZN19 808 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 GPR142Q7Z601 462 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 RABEPKQ7Z6M1 372 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 SLC47A2Q86VL8 602 aa1.87□□□□□ -2.11
RNF4-219ENST00000513450 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms