RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 DRD4P21917 467 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 RPL3P39023 403 aaKnown RBP14.02□□□□□ -0.17
NUP54-213ENST00000513352 XKP51811 444 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 CXADRP78310 365 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 DEFB109BQ30KR1 87 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 PGS1Q32NB8 556 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 C6orf163Q5TEZ5 329 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 PAPD4Q6PIY7 484 aaKnown RBP14.02□□□□□ -0.17
NUP54-213ENST00000513352 TMEM205Q6UW68 189 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 KIRREL2Q6UWL6 708 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 MED25Q71SY5 747 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 SPATA21Q7Z572 469 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 R3HCC1LQ7Z5L2 792 aaKnown RBP14.02□□□□□ -0.17
NUP54-213ENST00000513352 OR7A2PQ8NGA2 310 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.02□□□□□ -0.17
NUP54-213ENST00000513352 ADAMTS17Q8TE56 1095 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 PPWD1Q96BP3 646 aaKnown RBP14.02□□□□□ -0.17
NUP54-213ENST00000513352 IP6K3Q96PC2 410 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 ZBTB18Q99592 522 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 PRPF18Q99633 342 aaKnown RBP14.02□□□□□ -0.17
NUP54-213ENST00000513352 KCNK13Q9HB14 408 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 SLC35C2Q9NQQ7 365 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 EHD3Q9NZN3 535 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 TRIM33Q9UPN9 1127 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 POLHQ9Y253 713 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 ACACBO00763 2458 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 IGHV1-45A0A0A0MS14 117 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 ARGFXA6NJG6 315 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 PDPK1O15530 556 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 DYRK3O43781 588 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 COX6A1P12074 109 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 CPMP14384 443 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 PORP16435 677 aaPredicted RBP14.01□□□□□ -0.17
NUP54-213ENST00000513352 CSNK2A2P19784 350 aaPredicted RBP14.01□□□□□ -0.17
NUP54-213ENST00000513352 NT5EP21589 574 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 PGDP52209 483 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 CLNS1AP54105 237 aaKnown RBP14.01□□□□□ -0.17
NUP54-213ENST00000513352 CLDN8P56748 225 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 VAC14Q08AM6 782 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 GSTA3Q16772 222 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 SAMD14Q8IZD0 417 aaPredicted RBP14.01□□□□□ -0.17
NUP54-213ENST00000513352 MIER2Q8N344 545 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 LRRC25Q8N386 305 aaPredicted RBP14.01□□□□□ -0.17
NUP54-213ENST00000513352 OR11G2Q8NGC1 345 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 DOK4Q8TEW6 326 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 THAP4Q8WY91 577 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 RBM18Q96H35 190 aaKnown RBP14.01□□□□□ -0.17
NUP54-213ENST00000513352 LPAR4Q99677 370 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 PELOQ9BRX2 385 aaKnown RBP14.01□□□□□ -0.17
NUP54-213ENST00000513352 ZNF160Q9HCG1 818 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 ADAP2Q9NPF8 381 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 ATAD3AQ9NVI7 634 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 ADAM21Q9UKJ8 722 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 CES1P1Q9UKY3 287 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 MAPRE3Q9UPY8 281 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 EXO1Q9UQ84 846 aaKnown RBP14.01□□□□□ -0.17
NUP54-213ENST00000513352 CLCA3PQ9Y6N3 262 aa14.01□□□□□ -0.17
NUP54-213ENST00000513352 ANKRD11Q6UB99 2663 aaPredicted RBP14□□□□□ -0.17
NUP54-213ENST00000513352 LOC102723996A0A087X1L8 192 aa14□□□□□ -0.17
NUP54-213ENST00000513352 GABRR3A8MPY1 467 aa14□□□□□ -0.17
NUP54-213ENST00000513352 C17orf105B2RV13 164 aa14□□□□□ -0.17
NUP54-213ENST00000513352 C9JVG2 144 aa14□□□□□ -0.17
NUP54-213ENST00000513352 K7ENP7 123 aa14□□□□□ -0.17
NUP54-213ENST00000513352 MASP2O00187 686 aa14□□□□□ -0.17
NUP54-213ENST00000513352 HPP00738 406 aa14□□□□□ -0.17
NUP54-213ENST00000513352 EFNA1P20827 205 aaPredicted RBP14□□□□□ -0.17
NUP54-213ENST00000513352 PTGER1P34995 402 aa14□□□□□ -0.17
NUP54-213ENST00000513352 STT3AP46977 705 aa14□□□□□ -0.17
NUP54-213ENST00000513352 NCBP2P52298 156 aaKnown RBP eCLIP14□□□□□ -0.17
NUP54-213ENST00000513352 UFM1P61960 85 aa14□□□□□ -0.17
NUP54-213ENST00000513352 IGLV3-21P80748 117 aaPredicted RBP14□□□□□ -0.17
NUP54-213ENST00000513352 CHAF1BQ13112 559 aa14□□□□□ -0.17
NUP54-213ENST00000513352 PCOLCEQ15113 449 aa14□□□□□ -0.17
NUP54-213ENST00000513352 ELAVL1Q15717 326 aaKnown RBP14□□□□□ -0.17
NUP54-213ENST00000513352 ST3GAL2Q16842 350 aa14□□□□□ -0.17
NUP54-213ENST00000513352 PDCD4Q53EL6 469 aaKnown RBP14□□□□□ -0.17
NUP54-213ENST00000513352 ZNF385BQ569K4 471 aa14□□□□□ -0.17
NUP54-213ENST00000513352 CPTPQ5TA50 214 aa14□□□□□ -0.17
NUP54-213ENST00000513352 INO80CQ6PI98 192 aaPredicted RBP14□□□□□ -0.17
NUP54-213ENST00000513352 NDUFAF7Q7L592 441 aa14□□□□□ -0.17
NUP54-213ENST00000513352 ST13P4Q8IZP2 240 aaPredicted RBP14□□□□□ -0.17
NUP54-213ENST00000513352 C7orf57Q8NEG2 295 aa14□□□□□ -0.17
NUP54-213ENST00000513352 NUDT8Q8WV74 236 aa14□□□□□ -0.17
NUP54-213ENST00000513352 STON2Q8WXE9 905 aa14□□□□□ -0.17
NUP54-213ENST00000513352 CIDECQ96AQ7 238 aaPredicted RBP14□□□□□ -0.17
NUP54-213ENST00000513352 NACC2Q96BF6 587 aa14□□□□□ -0.17
NUP54-213ENST00000513352 MTERF3Q96E29 417 aa14□□□□□ -0.17
NUP54-213ENST00000513352 CNRIP1Q96F85 164 aaPredicted RBP14□□□□□ -0.17
NUP54-213ENST00000513352 FER1L6-AS2Q96M78 137 aa14□□□□□ -0.17
NUP54-213ENST00000513352 BRINP2Q9C0B6 783 aa14□□□□□ -0.17
NUP54-213ENST00000513352 ZNF700Q9H0M5 742 aa14□□□□□ -0.17
NUP54-213ENST00000513352 ATP6V1HQ9UI12 483 aa14□□□□□ -0.17
NUP54-213ENST00000513352 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
NUP54-213ENST00000513352 CLDN16Q9Y5I7 305 aa14□□□□□ -0.17
NUP54-213ENST00000513352 GPR45Q9Y5Y3 372 aa14□□□□□ -0.17
NUP54-213ENST00000513352 DMXL2Q8TDJ6 3036 aa14□□□□□ -0.17
NUP54-213ENST00000513352 SAGE2PA6NJ88 616 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 SRRM3A6NNA2 597 aaPredicted RBP13.99□□□□□ -0.17
NUP54-213ENST00000513352 SLC35E2P0CK97 266 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 MPIP34949 423 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms