RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 REM2Q8IYK8 340 aaPredicted RBP16.89■□□□□ 0.29
NUP54-205ENST00000507257 GPR65Q8IYL9 337 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 TCEANCQ8N8B7 351 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 ZNF557Q8N988 423 aaPredicted RBP16.89■□□□□ 0.29
NUP54-205ENST00000507257 TMEM145Q8NBT3 493 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 GPR137Q96N19 417 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 ARPC5LQ9BPX5 153 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 FAM83CQ9BQN1 747 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 GPR62Q9BZJ7 368 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 FOLH1BQ9HBA9 442 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 GKN1Q9NS71 199 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 MCUBQ9NWR8 336 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 ELF5Q9UKW6 265 aaPredicted RBP16.89■□□□□ 0.29
NUP54-205ENST00000507257 CDH10Q9Y6N8 788 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 K7ERQ8 282 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 FOXE1O00358 373 aaPredicted RBP16.88■□□□□ 0.29
NUP54-205ENST00000507257 IGSF6O95976 241 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 TP53P04637 393 aaPredicted RBP16.88■□□□□ 0.29
NUP54-205ENST00000507257 ATP1B2P14415 290 aaPredicted RBP16.88■□□□□ 0.29
NUP54-205ENST00000507257 CHI3L1P36222 383 aaPredicted RBP16.88■□□□□ 0.29
NUP54-205ENST00000507257 GAS1P54826 345 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 PGBD2Q6P3X8 592 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 PAQR6Q6TCH4 344 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 AMIGO1Q86WK6 493 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 OR4K1Q8NGD4 311 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 OR56A3Q8NH54 315 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 PPCDCQ96CD2 204 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 PTPN18Q99952 460 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 SGIP1Q9BQI5 828 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 PRRG3Q9BZD7 231 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 POLR2J3Q9H1A7 115 aaKnown RBP16.88■□□□□ 0.29
NUP54-205ENST00000507257 TEKT2Q9UIF3 430 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 ADAM30Q9UKF2 790 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 SPIN1Q9Y657 262 aaPredicted RBP16.88■□□□□ 0.29
NUP54-205ENST00000507257 RFPL3O75679 317 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 H1F0P07305 194 aaKnown RBP16.88■□□□□ 0.29
NUP54-205ENST00000507257 FEN1P39748 380 aaKnown RBP16.88■□□□□ 0.29
NUP54-205ENST00000507257 ETV5P41161 510 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 DGKGP49619 791 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 ETV1P50549 477 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 SEMG2Q02383 582 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 RAB40BQ12829 278 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 DSG2Q14126 1118 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 MPEG1Q2M385 716 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 CYP27C1Q4G0S4 372 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 SYT14P1Q58G82 188 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 ATAT1Q5SQI0 421 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 FAM71E1Q6IPT2 247 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 AGTRAPQ6RW13 159 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 HDDC2Q7Z4H3 204 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 SLC51BQ86UW2 128 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 LINC00471Q8N535 108 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 LSMEM1Q8N8F7 131 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 OR6K2Q8NGY2 324 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 OR52P1PQ8NH57 321 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 ASZ1Q8WWH4 475 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 UFD1Q92890 307 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 ECHDC3Q96DC8 303 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 HDHD5Q9BXW7 423 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 PIGUQ9H490 435 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 A4GALTQ9NPC4 353 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 NLKQ9UBE8 527 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 ICKQ9UPZ9 632 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 SPEF1Q9Y4P9 236 aa16.88■□□□□ 0.29
NUP54-205ENST00000507257 CXorf51AA0A1B0GTR3 108 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 PIPSLA2A3N6 862 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 H3BN98 237 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 QSOX1O00391 747 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 PDPK1O15530 556 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 PRKACBP22694 351 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 UQCRC1P31930 480 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 MAPK9P45984 424 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 RPS13P62277 151 aaKnown RBP16.87■□□□□ 0.29
NUP54-205ENST00000507257 ELAVL2Q12926 359 aaKnown RBP16.87■□□□□ 0.29
NUP54-205ENST00000507257 TCTN3Q6NUS6 607 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 MED27Q6P2C8 311 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 MZT2AQ6P582 158 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 USP45Q70EL2 814 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 WBP2Q969T9 261 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 CHFRQ96EP1 664 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 WDR34Q96EX3 536 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 ASIC4Q96FT7 647 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 OR4K3Q96R72 315 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 STOX2Q9P2F5 926 aaPredicted RBP16.87■□□□□ 0.29
NUP54-205ENST00000507257 RHCGQ9UBD6 479 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 MAP4K5Q9Y4K4 846 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 PCM1Q15154 2024 aa16.87■□□□□ 0.29
NUP54-205ENST00000507257 CCDC88CQ9P219 2028 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 ARHGEF33A8MVX0 844 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 FAM227AF5H4B4 570 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 INMT-MINDY4F8WBC2 141 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 OR10H3O60404 316 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 SOX14O95416 240 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 UQCRC2P22695 453 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 SSTR4P31391 388 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 TUFMP49411 452 aaKnown RBP16.86■□□□□ 0.29
NUP54-205ENST00000507257 RPS25P62851 125 aaKnown RBP16.86■□□□□ 0.29
NUP54-205ENST00000507257 PTSQ03393 145 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 TOR2AQ5JU69 321 aa16.86■□□□□ 0.29
NUP54-205ENST00000507257 PRICKLE2Q7Z3G6 844 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms