RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 TXNDC15Q96J42 360 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 PBKQ96KB5 322 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 BTBD9Q96Q07 612 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 CCT8L2Q96SF2 557 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZNF607Q96SK3 696 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 KRT12Q99456 494 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 FAM110AQ9BQ89 295 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 TMEM47Q9BQJ4 181 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 MGME1Q9BQP7 344 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZNF559Q9BR84 538 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 FUCA2Q9BTY2 467 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 YTHDF1Q9BYJ9 559 aaKnown RBP4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 ANO3Q9BYT9 981 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 ANKRD60Q9BZ19 345 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZNF350Q9GZX5 532 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 RBM38Q9H0Z9 239 aaKnown RBP4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 SLITRK2Q9H156 845 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 POLR3FQ9H1D9 316 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 OR10A5Q9H207 317 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 GOLPH3Q9H4A6 298 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 GAREM1Q9H706 876 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 LPAR2Q9HBW0 351 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 TM7SF3Q9NS93 570 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 GJB4Q9NTQ9 266 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 SLC38A7Q9NVC3 462 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 TMEM248Q9NWD8 314 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 NIP7Q9Y221 180 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 RHBDD3Q9Y3P4 386 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 MRPS18BQ9Y676 258 aaKnown RBP4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 CARMIL3Q8ND23 1372 aa4.5□□□□□ -1.69
HMGB3P9-201ENST00000441799 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 TAF1LQ8IZX4 1826 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 PRAMEF25A6NGN4 478 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 OOEPA6NGQ2 149 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 OR2AG2A6NM03 316 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 PRAMEF26H0Y7S4 382 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 MID1O15344 667 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 PAPSS1O43252 624 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 ADCY6O43306 1168 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 SLC28A2O43868 658 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 PRAMEF4O60810 478 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 PRAMEF11O60813 436 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 HUS1O60921 280 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 ATP2C2O75185 946 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 GLRA3O75311 464 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 AVILO75366 819 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 VPS26AO75436 327 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZWINTO95229 277 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 SEC24AO95486 1093 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 CCNE2O96020 404 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 HEXAP06865 529 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 ANXA4P09525 319 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 NBEAP1P0C6P0 100 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 SPI1P17947 270 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 AGAP20933 346 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 SAT1P21673 171 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 BMP5P22003 454 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 DGKAP23743 735 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 IL12BP29460 328 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 SHMT2P34897 504 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 THBS4P35443 961 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 AHRP35869 848 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 P2RY2P41231 377 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 MAP3K8P41279 467 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 PRKCIP41743 596 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 CSNK1EP49674 416 aaKnown RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 CXCR3P49682 368 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 CDH13P55290 713 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 TPTEP56180 551 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 NUTF2P61970 127 aaKnown RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 RPL23AP62750 156 aaKnown RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 ERVK-8P63133 956 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 MRPS11P82912 194 aaKnown RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 B4GALNT1Q00973 533 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 MEF2AQ02078 507 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 SEMG2Q02383 582 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 SP3Q02447 781 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 IRF8Q02556 426 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 HSF2Q03933 536 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 PUDPQ08623 228 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 SPP2Q13103 211 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 SLAMF1Q13291 335 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 SNTB1Q13884 538 aaKnown RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 ITIH4Q14624 930 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 HLXQ14774 488 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 OXA1LQ15070 435 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 CDK10Q15131 360 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 MED22Q15528 200 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 GUK1Q16774 197 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 TOR2AQ5JU69 321 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 PRAMEF5Q5TYX0 476 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 PRAMEF9Q5VWM5 478 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 FAM46CQ5VWP2 391 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 PRAMEF6Q5VXH4 476 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 CST9LP1Q5W188 147 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 RESP18Q5W5W9 173 aa4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 ARL6IP4Q66PJ3 421 aaKnown RBP4.49□□□□□ -1.69
HMGB3P9-201ENST00000441799 KRT39Q6A163 491 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms