RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PCNPQ8WW12 178 aaKnown RBP11.55□□□□□ -0.56
UBR4-205ENST00000417040 MYH7P12883 1935 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 CENPBD1B2RD01 187 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 FAAHO00519 579 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 KCNJ13O60928 360 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 CD9P21926 228 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 HTR2AP28223 471 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 GABRA3P34903 492 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 SERINC3Q13530 473 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 PAGE3Q5JUK9 113 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 ATAD3CQ5T2N8 411 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 Q8N9G6 341 aaPredicted RBP11.55□□□□□ -0.56
UBR4-205ENST00000417040 OR2AP1Q8NGE2 309 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 C15orf40Q8WUR7 153 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 NPY6RQ99463 290 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 SLA2Q9H6Q3 261 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 CRTAC1Q9NQ79 661 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 MRC1P22897 1456 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 CAPN14A8MX76 684 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 PRAMEF11O60813 436 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 ALDOBP05062 364 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 ATP5A1P25705 553 aaKnown RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 AK4P27144 223 aaPredicted RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 FOXA1P55317 472 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 CLRN1P58418 232 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 RAB5BP61020 215 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 FLYWCH1Q4VC44 716 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 MEDAGQ5VYS4 303 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 CES4AQ5XG92 561 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 OR2T33Q8NG76 320 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 OR9A1PQ8NGU1 263 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 NAA50Q9GZZ1 169 aaKnown RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 SYT4Q9H2B2 425 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 FAM124BQ9H5Z6 455 aaPredicted RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 ZNF225Q9UK10 706 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 ACTL7AQ9Y615 435 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 DLG5Q8TDM6 1919 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 MAPK3P27361 379 aaPredicted RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 CNR2P34972 360 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 ETV3P41162 512 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 LEPRP48357 1165 aaKnown RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 OR52E8Q6IFG1 317 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 PDZD9Q8IXQ8 264 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 KREMEN2Q8NCW0 462 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 TREX2Q9BQ50 279 aaPredicted RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 SCML2Q9UQR0 700 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 DNAJC15Q9Y5T4 150 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 SPCS2Q15005 226 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 DCDC5Q6ZRR9 648 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 SAMD14Q8IZD0 417 aaPredicted RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 SLC5A8Q8N695 610 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 C3orf58Q8NDZ4 430 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 TRMT10AQ8TBZ6 339 aaKnown RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 UTP4Q969X6 686 aaKnown RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 CIDECQ96AQ7 238 aaPredicted RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 PLIN4Q96Q06 1357 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 ARPC4-TTLL3A0A0A6YYG9 625 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 FAM171A2A8MVW0 826 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 G3V2L1 256 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 ARPC5O15511 151 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 RAD1O60671 282 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 IFNA2P01563 188 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 GKN3PP0CG01 181 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 DNAJB1P25685 340 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 CA5AP35218 305 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 CDKN2CP42773 168 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 SLC29A4Q7RTT9 530 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 GID4Q8IVV7 300 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 GATA6Q92908 595 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 LMF1Q96S06 567 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 CCDC32Q9BV29 185 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 TXLNGYQ9BZA5 131 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 KCNS2Q9ULS6 477 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 DHDHQ9UQ10 334 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 ANKRD26Q9UPS8 1709 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 HYKKA2RU49 373 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 ANHXE9PGG2 379 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 AGR2O95994 175 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 TYRP1P17643 537 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 KDELR2P33947 212 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 RBMXP38159 391 aaKnown RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 ETV4P43268 484 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 DYRK1AQ13627 763 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 PLBD1Q6P4A8 553 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 SLC16A9Q7RTY1 509 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 PLA2G15Q8NCC3 412 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 CHDHQ8NE62 594 aaPredicted RBP11.54□□□□□ -0.56
UBR4-205ENST00000417040 IL17FQ96PD4 163 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 KCNK13Q9HB14 408 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 ARMC1Q9NVT9 282 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 IL37Q9NZH6 218 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 ABCC6O95255 1503 aa11.54□□□□□ -0.56
UBR4-205ENST00000417040 AGPAT2O15120 278 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 ARHGAP1Q07960 439 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 CDK5R2Q13319 367 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 CEP68Q76N32 757 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 NUP43Q8NFH3 380 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 RIT1Q92963 219 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 RAB11FIP5Q9BXF6 653 aa11.53□□□□□ -0.56
UBR4-205ENST00000417040 F8W036 122 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms