RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 HSF2Q03933 536 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 SLBPQ14493 270 aaKnown RBP eCLIP8.42□□□□□ -1.06
RTN4-206ENST00000394611 IHHQ14623 411 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 PARP15Q460N3 678 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 PTRH1Q86Y79 214 aaKnown RBP8.42□□□□□ -1.06
RTN4-206ENST00000394611 ZBTB44Q8NCP5 570 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 TNFAIP8L1Q8WVP5 186 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 NKD1Q969G9 470 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 RHBDF1Q96CC6 855 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 TMEM80Q96HE8 168 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 QRFPRQ96P65 431 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 ACBD6Q9BR61 282 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 MS4A7Q9GZW8 240 aaPredicted RBP8.42□□□□□ -1.06
RTN4-206ENST00000394611 SLC32A1Q9H598 525 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 ADAM30Q9UKF2 790 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 CACNA1DQ01668 2161 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 A0A0B4J203 849 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 TRBV4-1A0A0J9YWV2 114 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 C2orf78A6NCI8 922 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 STX16O14662 325 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ARPC5O15511 151 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 SMAD6O43541 496 aaKnown RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 RPP14O95059 124 aaKnown RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 MT-ND4P03905 459 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ALDOBP05062 364 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 PRPS1L1P21108 318 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 PCMT1P22061 227 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 KELP23276 732 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ITGB8P26012 769 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 GIFP27352 417 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ERP29P30040 261 aaKnown RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 STARP49675 285 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 GDI2P50395 445 aaKnown RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 KIAA1024LP59773 190 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 UBE2MP61081 183 aaKnown RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 MGAT3Q09327 533 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 NTRK2Q16620 822 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 TXNDC8Q6A555 127 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 RETSATQ6NUM9 610 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ZCCHC12Q6PEW1 402 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 SNX20Q7Z614 316 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 TMED4Q7Z7H5 227 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 IQCF2Q8IXL9 164 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 CYB561A3Q8NBI2 242 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 OR8S1Q8NH09 359 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 KCNJ9Q92806 393 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 VMP1Q96GC9 406 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 SECISBP2Q96T21 854 aaKnown RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 DOHHQ9BU89 302 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 C11orf84Q9BUA3 381 aaPredicted RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 PDCD10Q9BUL8 212 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 SLC7A5P2Q9GIP4 190 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 MYEF2Q9P2K5 600 aaKnown RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 FBXW2Q9UKT8 454 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 TRPV2Q9Y5S1 764 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 SIP14410 1827 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ACSL4O60488 711 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 CATP04040 527 aaKnown RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 SRCP12931 536 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 STOMP27105 288 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 PTPN6P29350 595 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 CCR4P51679 360 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 CRISP1P54107 249 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 CDH11P55287 796 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 LASP1Q14847 261 aaKnown RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 GRIN2CQ14957 1233 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 PLBD1Q6P4A8 553 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 MZT2AQ6P582 158 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 BRAT1Q6PJG6 821 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 KLK6Q92876 244 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ZCCHC3Q9NUD5 404 aaKnown RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 NLE1Q9NVX2 485 aaPredicted RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 GLTPQ9NZD2 209 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 DHRS7Q9Y394 339 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ALPK3Q96L96 1907 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 HMX3A6NHT5 357 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 RGS11O94810 467 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 CHMP24386 653 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 SERPINA4P29622 427 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 SOX18P35713 384 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 FAM27D1Q5T7N8 215 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 C1orf53Q5VUE5 145 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ATG9BQ674R7 924 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 FAAP20Q6NZ36 180 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 Q6ZVL8 140 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 MSRB3Q8IXL7 192 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 KRT78Q8N1N4 520 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 TMEM174Q8WUU8 243 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ORAI1Q96D31 301 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 YIPF6Q96EC8 236 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 ELMOD3Q96FG2 381 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 CPNE2Q96FN4 548 aaPredicted RBP8.41□□□□□ -1.06
RTN4-206ENST00000394611 TOX2Q96NM4 488 aa8.41□□□□□ -1.06
RTN4-206ENST00000394611 SCN5AQ14524 2016 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 L7N2F9 121 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 MAGEB4O15481 346 aaPredicted RBP8.4□□□□□ -1.06
RTN4-206ENST00000394611 HCN1O60741 890 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 PDGFAP04085 211 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 PRPS2P11908 318 aa8.4□□□□□ -1.06
RTN4-206ENST00000394611 GGT2P36268 569 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms