RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 NDNFQ8TB73 568 aa17.14■□□□□ 0.33
CD40-201ENST00000372276 ASB12Q8WXK4 309 aa17.14■□□□□ 0.33
CD40-201ENST00000372276 EXOSC8Q96B26 276 aaKnown RBP17.14■□□□□ 0.33
CD40-201ENST00000372276 MROQ9BYG7 248 aa17.14■□□□□ 0.33
CD40-201ENST00000372276 MRPS30Q9NP92 439 aaKnown RBP17.14■□□□□ 0.33
CD40-201ENST00000372276 SLAMF7Q9NQ25 335 aa17.14■□□□□ 0.33
CD40-201ENST00000372276 LHX9Q9NQ69 397 aa17.14■□□□□ 0.33
CD40-201ENST00000372276 CCDC59Q9P031 241 aaKnown RBP17.14■□□□□ 0.33
CD40-201ENST00000372276 PCDH10Q9P2E7 1040 aa17.14■□□□□ 0.33
CD40-201ENST00000372276 AASSQ9UDR5 926 aa17.14■□□□□ 0.33
CD40-201ENST00000372276 PCYT1BQ9Y5K3 369 aaPredicted RBP17.14■□□□□ 0.33
CD40-201ENST00000372276 GPC6Q9Y625 555 aaPredicted RBP17.14■□□□□ 0.33
CD40-201ENST00000372276 COLEC10Q9Y6Z7 277 aa17.14■□□□□ 0.33
CD40-201ENST00000372276 J3QRK9 145 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 RTCAO00442 366 aaKnown RBP17.13■□□□□ 0.33
CD40-201ENST00000372276 CASC3O15234 703 aaKnown RBP17.13■□□□□ 0.33
CD40-201ENST00000372276 SLC28A2O43868 658 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 GASTP01350 101 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 HOXC4P09017 264 aaPredicted RBP17.13■□□□□ 0.33
CD40-201ENST00000372276 NR4A1P22736 598 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 GPC1P35052 558 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 MLLT10P55197 1068 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 ST3GAL4Q11206 333 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 HSPB3Q12988 150 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 PUM1Q14671 1186 aaKnown RBP eCLIP17.13■□□□□ 0.33
CD40-201ENST00000372276 UAP1L1Q3KQV9 507 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 ITPRIPL2Q3MIP1 535 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 TMEM201Q5SNT2 666 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 RNLSQ5VYX0 342 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 KLHL17Q6TDP4 642 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 UBE3DQ7Z6J8 389 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 TRIM69Q86WT6 500 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 CCDC103Q8IW40 242 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 OR2A1Q8NGT9 310 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 BBS4Q96RK4 519 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 DPH7Q9BTV6 452 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 BTBD1Q9H0C5 482 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 DCSTAMPQ9H295 470 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 TRIM45Q9H8W5 580 aaPredicted RBP17.13■□□□□ 0.33
CD40-201ENST00000372276 GIMAP4Q9NUV9 329 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 RHBDL2Q9NX52 303 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 MS4A12Q9NXJ0 267 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 SNX7Q9UNH6 387 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 CORINQ9Y5Q5 1042 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 MYO7AQ13402 2215 aa17.13■□□□□ 0.33
CD40-201ENST00000372276 A0A0G2JPF8 293 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 A0A1W2PRQ8 180 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 FEZF1A0PJY2 475 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 ISPDA4D126 451 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 HNRNPCL2B2RXH8 293 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 HNRNPCL3B7ZW38 293 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 J3KTA2 159 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 TMPRSS11DO60235 418 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 HNRNPCL4P0DMR1 293 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 NR2F1P10589 423 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 ACP5P13686 325 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 CHMP24386 653 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 CMPK1P30085 196 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 BMP8BP34820 402 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 SLC19A1P41440 591 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 ZNF404Q494X3 552 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 NDUFAF5Q5TEU4 345 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 SLX4IPQ5VYV7 408 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 ADCK2Q7Z695 626 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 LINC01555Q8NAE3 123 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 MCFD2Q8NI22 146 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 GTPBP3Q969Y2 492 aaKnown RBP17.12■□□□□ 0.33
CD40-201ENST00000372276 FAM131CQ96AQ9 280 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 AMDHD1Q96NU7 426 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 SLIRPQ9GZT3 109 aaKnown RBP17.12■□□□□ 0.33
CD40-201ENST00000372276 PRO3102Q9H379 93 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 SIAEQ9HAT2 523 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 CALML5Q9NZT1 146 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 HCN2Q9UL51 889 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 SCML1Q9UN30 329 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 MYO10Q9HD67 2058 aa17.12■□□□□ 0.33
CD40-201ENST00000372276 CKAP5Q14008 2032 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 PRR19A6NJB7 356 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 M0R082 166 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 MAN1A2O60476 641 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 C21orf33P30042 268 aaPredicted RBP17.11■□□□□ 0.33
CD40-201ENST00000372276 IDUAP35475 653 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 PPP5CP53041 499 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 SFSWAPQ12872 951 aaKnown RBP17.11■□□□□ 0.33
CD40-201ENST00000372276 TP53BP2Q13625 1128 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 GANABQ14697 944 aaKnown RBP17.11■□□□□ 0.33
CD40-201ENST00000372276 NCF4Q15080 339 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 INAQ16352 499 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 PLAG1Q6DJT9 500 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 TCTN3Q6NUS6 607 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 KIAA1211LQ6NV74 962 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 GDPGP1Q6ZNW5 385 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 LACC1Q8IV20 430 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 MMP21Q8N119 569 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 ELSPBP1Q96BH3 223 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 SCARF2Q96GP6 870 aaPredicted RBP17.11■□□□□ 0.33
CD40-201ENST00000372276 OSGEPL1Q9H4B0 414 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 FZD3Q9NPG1 666 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 MBNL1Q9NR56 388 aaKnown RBP17.11■□□□□ 0.33
CD40-201ENST00000372276 TM7SF3Q9NS93 570 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms