RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 PDLIM5Q96HC4 596 aaKnown RBP16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 RIMS3Q9UJD0 308 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 AP1M2Q9Y6Q5 423 aa16.34■□□□□ 0.21
TRAPPC11-201ENST00000334690 A0A1W2PQU0 124 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 ANHXE9PGG2 379 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 TYRP1P17643 537 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 SDC1P18827 310 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 ADRA1AP35348 466 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 PPP5CP53041 499 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 FAM189BP81408 668 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 RGNQ15493 299 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 C12orf40Q86WS4 652 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 ACBD7Q8N6N7 88 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 THEM6Q8WUY1 208 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 KLHDC7BQ96G42 594 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 C3orf30Q96M34 536 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 HS6ST2Q96MM7 605 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 GORASP2Q9H8Y8 452 aa16.33■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF860A6NHJ4 632 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 CLCA1A8K7I4 914 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 EPCAMP16422 314 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 TCEA1P23193 301 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 RPS26P62854 115 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZNF782Q6ZMW2 699 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 GALNT10Q86SR1 603 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 SERPINA11Q86U17 422 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR8H3Q8N146 312 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR4K5Q8NGD3 323 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 SUN5Q8TC36 379 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 MS4A4AQ96JQ5 239 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 NUAK1O60285 661 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 CSF2P04141 144 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 GSTT2P0CG29 244 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 HK3P52790 923 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 GFOD2Q3B7J2 385 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 RUNDC3AQ59EK9 446 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 GKN2Q86XP6 184 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 GPR26Q8NDV2 337 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 FRS2Q8WU20 508 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 G6PC3Q9BUM1 346 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 SMURF1Q9HCE7 757 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 GRHPRQ9UBQ7 328 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 PCDHGB2Q9Y5G2 931 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 PPP6CO00743 305 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 SMAD6O43541 496 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 GJA8P48165 433 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 TAS2R38P59533 333 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 RPS15AP62244 130 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 ARF5P84085 180 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 CPZQ66K79 652 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 PAQR7Q86WK9 346 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 ARMC10Q8N2F6 343 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZNF548Q8NEK5 533 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 EXTL2Q9UBQ6 330 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 SARDHQ9UL12 918 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 MEMO1Q9Y316 297 aa16.33■□□□□ 0.2
TRAPPC11-201ENST00000334690 SDK1Q7Z5N4 2213 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 SMIM30A4D0T7 59 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 IGLON5A6NGN9 336 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 SLC22A31A6NKX4 558 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 MITFO75030 526 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 RLN2P04090 185 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 NDUFV2P19404 249 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 AKR1D1P51857 326 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 SELENOWP63302 87 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 CAMK1Q14012 370 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZNF551Q7Z340 670 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZNF227Q86WZ6 799 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 CPXM2Q8N436 756 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 DRAXINQ8NBI3 349 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 CREB3L1Q96BA8 519 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 INPP5KQ9BT40 448 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 KLF16Q9BXK1 252 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 HEPACAM2A8MVW5 462 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 RFPL2O75678 378 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 GADD45AP24522 165 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 OXTRP30559 389 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 CDK5R2Q13319 367 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 GK3PQ14409 553 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 NFE2L1Q14494 772 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 MAPK14Q16539 360 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 ARHGAP40Q5TG30 622 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR4C11Q6IEV9 310 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 BORAQ6PGQ7 559 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 LHFPL3Q86UP9 236 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 AMIGO1Q86WK6 493 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 JAGN1Q8N5M9 183 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 SAMD12Q8N8I0 201 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 LRRC20Q8TCA0 184 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 JSRP1Q96MG2 331 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 SFXN1Q9H9B4 322 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 LRRN3E7EW58 273 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 GABRA3P34903 492 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 MAZP56270 477 aaKnown RBP16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 HYAL2Q12891 473 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 KEAP1Q14145 624 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 DCP2Q8IU60 420 aaKnown RBP16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 NAGSQ8N159 534 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR51A7Q8NH64 312 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 MAL2Q969L2 176 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms