RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FN3KRPQ9HA64 309 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 FAM120CQ9NX05 1096 aaKnown RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 LRRTM2O43300 516 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 P04436 131 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 ASPAP45381 313 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 FXYD4P59646 89 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 RCAN2Q14206 197 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 LRFN4Q6PJG9 635 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 MOB2Q70IA6 237 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 MCATQ8IVS2 390 aaKnown RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 HORMAD2Q8N7B1 307 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 CD99L2Q8TCZ2 262 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 UNKLQ9H9P5 680 aaKnown RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 FZD4Q9ULV1 537 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 YJEFN3A6XGL0 299 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 HAS3O00219 553 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 UGT1A4P22310 534 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 SLC18A1P54219 525 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 RAB35Q15286 201 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 PDE12Q6L8Q7 609 aaKnown RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 TMEM234Q8WY98 164 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 FAM122AQ96E09 287 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 PLCXD1Q9NUJ7 323 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 OXSMQ9NWU1 459 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 DHDHQ9UQ10 334 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 COQ4Q9Y3A0 265 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 HMX3A6NHT5 357 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 TLR4O00206 839 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 HCRTR2O43614 444 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 SOX30O94993 753 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 SYPP08247 313 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 ADH5P11766 374 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 CSKP41240 450 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 ARG2P78540 354 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 ANKRD22Q5VYY1 191 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 TRIB2Q92519 343 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 OSTF1Q92882 214 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 IL4I1Q96RQ9 567 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 NLGN3Q9NZ94 848 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 SHROOM3Q8TF72 1996 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 KIF1AQ12756 1690 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 ERI3O43414 337 aaKnown RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 ARRB1P49407 418 aaPredicted RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 DGKQP52824 942 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 MAB21L1Q13394 359 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 ZNF776Q68DI1 518 aaPredicted RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 DCP2Q8IU60 420 aaKnown RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 IRF2BP1Q8IU81 584 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 PYROXD2Q8N2H3 581 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 OR6N2Q8NGY6 317 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 MSANTD3Q96H12 275 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 PPP4R1LQ9P1A2 415 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 SMIM30A4D0T7 59 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 ZNF705GA8MUZ8 300 aaPredicted RBP11.59□□□□□ -0.55
PCF11-201ENST00000298281 F5H0A9 414 aaPredicted RBP11.59□□□□□ -0.55
PCF11-201ENST00000298281 TP53I11O14683 189 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 CAPN3P20807 821 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 NRLP54845 237 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 FUT2Q10981 343 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 DUOXA1Q1HG43 343 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 WDR45BQ5MNZ6 344 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 MBLAC2Q68D91 279 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 CRTC1Q6UUV9 634 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 GATSQ8NAP1 163 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 TUBA1CQ9BQE3 449 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 FZD8Q9H461 694 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 NAALAD2Q9Y3Q0 740 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 C17orf113A0A1B0GUU1 675 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 ZNF891A8MT65 544 aaPredicted RBP11.59□□□□□ -0.55
PCF11-201ENST00000298281 OR8U9P0C7N5 309 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 NRIP1P48552 1158 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 DUSP3P51452 185 aaPredicted RBP11.59□□□□□ -0.55
PCF11-201ENST00000298281 GALNT15Q8N3T1 639 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 CNEP1R1Q8N9A8 125 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 OR2AP1Q8NGE2 309 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 OR2A12Q8NGT7 310 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 KCNK13Q9HB14 408 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 KIAA0100Q14667 2235 aaKnown RBP11.59□□□□□ -0.55
PCF11-201ENST00000298281 LAMTOR5O43504 91 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 VEGFDO43915 354 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 EPHA4P54764 986 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 C9orf152Q5JTZ5 239 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 MOAP1Q96BY2 351 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 NOCTQ9UK39 431 aaKnown RBP11.59□□□□□ -0.55
PCF11-201ENST00000298281 BCHEP06276 602 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 CD48P09326 243 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 MOGSQ13724 837 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 ZNF529Q6P280 563 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 CDKN2AIPNLQ96HQ2 116 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 CGREF1Q99674 301 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 ATP1B2P14415 290 aaPredicted RBP11.59□□□□□ -0.55
PCF11-201ENST00000298281 PIGGQ5H8A4 983 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 OR1S1Q8NH92 325 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 BTBD1Q9H0C5 482 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 ACTL8Q9H568 366 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 TCAPO15273 167 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 MRPL3P09001 348 aaKnown RBP11.59□□□□□ -0.55
PCF11-201ENST00000298281 RNF144AP50876 292 aaPredicted RBP11.59□□□□□ -0.55
PCF11-201ENST00000298281 CLCNKAP51800 687 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms