RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 M0R233 179 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 MEN1O00255 615 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 EEF1E1O43324 174 aaKnown RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 PAK4O96013 591 aaPredicted RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 ERP29P30040 261 aaKnown RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 NAA10P41227 235 aaPredicted RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 FNTBP49356 437 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 GPR143P51810 404 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 PLCXD2Q0VAA5 305 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 ZNF420Q8TAQ5 688 aaPredicted RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 IMP4Q96G21 291 aaKnown RBP11.08□□□□□ -0.64
LAMA4-201ENST00000230538 MROQ9BYG7 248 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 KCNIP3Q9Y2W7 256 aa11.08□□□□□ -0.64
LAMA4-201ENST00000230538 CLCA1A8K7I4 914 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 TUBG1P23258 451 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 PIAS4Q8N2W9 510 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-201ENST00000230538 SCAMP4Q969E2 229 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 STRA6Q9BX79 667 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 FN3KQ9H479 309 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 COL14A1Q05707 1796 aaKnown RBP11.07□□□□□ -0.64
LAMA4-201ENST00000230538 A0A1W2PP55 124 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 A0A1W2PPK0 400 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 RBBP9O75884 186 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 NPR2P20594 1047 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 TREML1Q86YW5 311 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 DTX3Q8N9I9 347 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 IGSF21Q96ID5 467 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 GPR34Q9UPC5 381 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 NALCNQ8IZF0 1738 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 INMT-MINDY4F8WBC2 141 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 H7C417 338 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 SOCS2O14508 198 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 HPRP00739 348 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 FRKP42685 505 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-201ENST00000230538 ZNF81P51508 661 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 TBPL1P62380 186 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 FADDQ13158 208 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 RNF111Q6ZNA4 994 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 ZER1Q7Z7L7 766 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 TRIM73Q86UV7 250 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 LRRC25Q8N386 305 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-201ENST00000230538 RHEBL1Q8TAI7 183 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 PXYLP1Q8TE99 480 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 WDR92Q96MX6 357 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 FEZF1A0PJY2 475 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 RNGTTO60942 597 aaKnown RBP11.07□□□□□ -0.64
LAMA4-201ENST00000230538 PPM1BO75688 479 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 RHOP08100 348 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 ZNF35P13682 527 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 HSD3B2P26439 372 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 HTR1EP28566 365 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 HK3P52790 923 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 TMBIM6P55061 237 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 CDKN2DP55273 166 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 KCNAB2Q13303 367 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 USF2Q15853 346 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-201ENST00000230538 VTCN1Q7Z7D3 282 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 THAP3Q8WTV1 239 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-201ENST00000230538 GATAD2BQ8WXI9 593 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 SHISA4Q96DD7 197 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 TGM7Q96PF1 710 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 NELFAQ9H3P2 528 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 SIGLEC1Q9BZZ2 1709 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 BORCS7-ASMTA0A0B4J1R7 106 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 CD3GP09693 182 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 ZNF182P17025 639 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-201ENST00000230538 GNMTQ14749 295 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 HS3ST5Q8IZT8 346 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 ZBTB8BQ8NAP8 495 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-201ENST00000230538 OR52P1PQ8NH57 321 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 OR1F2PQ96R84 312 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 MKS1Q9NXB0 559 aa11.07□□□□□ -0.64
LAMA4-201ENST00000230538 DNMT3AQ9Y6K1 912 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-201ENST00000230538 C1orf226A1L170 272 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 EEDO75530 441 aaKnown RBP11.06□□□□□ -0.64
LAMA4-201ENST00000230538 RGS9O75916 674 aaPredicted RBP11.06□□□□□ -0.64
LAMA4-201ENST00000230538 PRKCAP17252 672 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 SLC26A5P58743 744 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 POU4F2Q12837 409 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 CCINQ13939 588 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 TBRG1Q3YBR2 411 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 SLC36A3Q495N2 470 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 PIGGQ5H8A4 983 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 ZC3H3Q8IXZ2 948 aaKnown RBP11.06□□□□□ -0.64
LAMA4-201ENST00000230538 SYNPOQ8N3V7 929 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 RANBP9Q96S59 729 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 PHOX2BQ99453 314 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 KATNBL1Q9H079 304 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 MVB12BQ9H7P6 319 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 PHLPP1O60346 1717 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 SDHDO14521 159 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 HRGP04196 525 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 HSD3B1P14060 373 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 AK4P27144 223 aaPredicted RBP11.06□□□□□ -0.64
LAMA4-201ENST00000230538 HSD11B2P80365 405 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 CES4AQ5XG92 561 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 RELL1Q8IUW5 271 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 OR51A7Q8NH64 312 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 PROKR1Q8TCW9 393 aa11.06□□□□□ -0.64
LAMA4-201ENST00000230538 NEDD4LQ96PU5 975 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms