RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 DEPDC1Q5TB30 811 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 CCDC91Q7Z6B0 441 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 RPRMLQ8N4K4 120 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 ZNF721Q8TF20 911 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 NINJ1Q92982 152 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 DGAT2Q96PD7 388 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 MAPKAP1Q9BPZ7 522 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 ACKR4Q9NPB9 350 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 PHF11Q9UIL8 331 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 RNF112Q9ULX5 631 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 BOKQ9UMX3 212 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 TSC22D4Q9Y3Q8 395 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 ATG4BQ9Y4P1 393 aa16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-227ENST00000602011 NAV3Q8IVL0 2385 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 TRGV5A0A0B4J1U4 118 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 TP73O15350 636 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 CCNT2O60583 730 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 PRAMEF4O60810 478 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 LDB3O75112 727 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 SERPINB3P29508 390 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 PIK3CBP42338 1070 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 MAGEA5P43359 124 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 RAB10P61026 200 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 FOLH1Q04609 750 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 CALCOCO2Q13137 446 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 MYBPHQ13203 477 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 ZNF791Q3KP31 576 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 TBCELQ5QJ74 424 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 RIPPLY2Q5TAB7 128 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 GRTP1Q5TC63 336 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 PRAMEF9Q5VWM5 478 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 OR4C11Q6IEV9 310 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 UBE3DQ7Z6J8 389 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 TMEM200AQ86VY9 491 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 PAQR8Q8TEZ7 354 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 RGMAQ96B86 450 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 ANKRD9Q96BM1 317 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 RBBP8Q99708 897 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 NMRAL1Q9HBL8 299 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 PRM3Q9NNZ6 103 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 ZFP64Q9NPA5 681 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 PSD3Q9NYI0 1048 aa16.46■□□□□ 0.23
SHKBP1-227ENST00000602011 HSPB2A8KAH6 182 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 CAPN14A8MX76 684 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 NADKO95544 446 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 ETHE1O95571 254 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 IGKV3-11P04433 115 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 CD22P20273 847 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 GALNSP34059 522 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 SSR2P43308 183 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 ART1P52961 327 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 PLIN5Q00G26 463 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 SLAMF1Q13291 335 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 FASTKD3Q14CZ7 662 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 ZKSCAN8Q15776 578 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 HSPB2Q16082 182 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 KHDRBS2Q5VWX1 349 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 ZNF793Q6ZN11 406 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 C3orf62Q6ZUJ4 267 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 MAATS1Q7Z4T9 603 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 GPR180Q86V85 440 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 ST13P4Q8IZP2 240 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 FBXW8Q8N3Y1 598 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 ZCCHC7Q8N3Z6 543 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 CHDHQ8NE62 594 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 OR7G3Q8NG95 312 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 OR5M9Q8NGP3 310 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 FBXL20Q96IG2 436 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 TRIM31Q9BZY9 425 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 EXO5Q9H790 373 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 RPF2Q9H7B2 306 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 SH2D2AQ9NP31 389 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 NUDT4Q9NZJ9 180 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 WHRNQ9P202 907 aa16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 PHF3Q92576 2039 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-227ENST00000602011 IQANK1A0A1B0GTG1 560 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 ATP6AP2A0A1C7CYW4 349 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 ANKRD33BA6NCL7 494 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 FAM187AA6NFU0 413 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 OR6C76A6NM76 312 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 SYCE1LA8MT33 242 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 AHRRA9YTQ3 701 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 K7EPI3 171 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 ATP6AP2O75787 350 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 EPB42P16452 691 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 PTX3P26022 381 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 CRABP2P29373 138 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 BUD31P41223 144 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 PHEXP78562 749 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 ASPHQ12797 758 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 OR4D1Q15615 310 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 C1orf185Q5T7R7 199 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 LIPJQ5W064 366 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 SLC29A4Q7RTT9 530 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 SPATA6LQ8N4H0 392 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 ESAMQ96AP7 390 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 REPS1Q96D71 796 aa16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 SPACA9Q96E40 222 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-227ENST00000602011 FOXC2Q99958 501 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms