RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SOX3P41225 446 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 STT3AP46977 705 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 HK2P52789 917 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 RNF4P78317 190 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 FOLH1Q04609 750 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 C3AR1Q16581 482 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 SGO1Q5FBB7 561 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 RNFT1Q5M7Z0 435 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 METTL2BQ6P1Q9 378 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 MTFR2Q6P444 385 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 TIFABQ6ZNK6 161 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 RPS27LQ71UM5 84 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 NUDT13Q86X67 352 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 SIAH3Q8IW03 269 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 GHDCQ8N2G8 530 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 ZCCHC7Q8N3Z6 543 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 WDR20Q8TBZ3 569 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 DOK4Q8TEW6 326 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 UBLCP1Q8WVY7 318 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 TANKQ92844 425 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 RBM18Q96H35 190 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 CCDC120Q96HB5 630 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 MRPL57Q9BQC6 102 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 MRPL46Q9H2W6 279 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 LYARQ9NX58 379 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 PCTPQ9UKL6 214 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 ATG4BQ9Y4P1 393 aa11.8□□□□□ -0.52
NPLOC4-213ENST00000573519 CROCCQ5TZA2 2017 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 IQANK1A0A1B0GTG1 560 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 TMEM200CA6NKL6 621 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 SMIM23A6NLE4 172 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 PRSS44E7EML9 344 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 FOXE1O00358 373 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 PROM1O43490 865 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 HS6ST1O60243 411 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 OR10H2O60403 315 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 OR6B1O95007 311 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 SBK3P0C264 359 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 FAM58BPP0C7Q3 252 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 NR2F6P10588 404 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 ALOX15P16050 662 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 TSPAN8P19075 237 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 PTGER1P34995 402 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 BSGP35613 385 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 SLCO1A2P46721 670 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 PLIN5Q00G26 463 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 PLGLB1Q02325 96 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 IFT88Q13099 833 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 CUL3Q13618 768 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 FAM219BQ5XKK7 198 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 MILR1Q7Z6M3 343 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 MRGPRGQ86SM5 289 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 SPPL2CQ8IUH8 684 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 GPALPP1Q8IXQ4 340 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 EIF1ADQ8N9N8 165 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 POGLUT1Q8NBL1 392 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 PSD4Q8NDX1 1056 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 C7orf57Q8NEG2 295 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 OR4F6Q8NGB9 312 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 OR5L2Q8NGL0 311 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 ZNF721Q8TF20 911 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 MTBPQ96DY7 904 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 RASL10BQ96S79 203 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 SERPINI1Q99574 410 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 CNPPD1Q9BV87 410 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 ELOVL6Q9H5J4 265 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 WDR41Q9HAD4 459 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 TMEM216Q9P0N5 145 aa11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 PSMC3IPQ9P2W1 217 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 V9GYY5 206 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-213ENST00000573519 A0A0A6YYD5 115 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 ARHGAP10A1A4S6 786 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 WASHC1A8K0Z3 465 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 A8MT66 165 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 G3V3Y1 287 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 TMPRSS11DO60235 418 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 PYGBP11216 843 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 TNFRSF8P28908 595 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 ARFIP1P53367 373 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 CDH13P55290 713 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 VSNL1P62760 191 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 IGLV3-21P80748 117 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 TRAF3Q13114 568 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 BIKQ13323 160 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 ZNF750Q32MQ0 723 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 FRG2Q64ET8 278 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 DGAT2L6Q6ZPD8 337 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 TMEM151AQ8N4L1 468 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 OR8K3Q8NH51 312 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 ITLN2Q8WWU7 325 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 SENP5Q96HI0 755 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 ART5Q96L15 291 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 FRG2BQ96QU4 278 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 NTMT1Q9BV86 223 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 ZNF717Q9BY31 904 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 DDX31Q9H8H2 851 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 ZBTB26Q9HCK0 441 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 ASB4Q9Y574 426 aa11.78□□□□□ -0.52
NPLOC4-213ENST00000573519 A0A1W2PPM1 405 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms