RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 NCBP2P52298 156 aaKnown RBP eCLIP13.03□□□□□ -0.32
TPM1-215ENST00000558868 BNC1Q01954 994 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 HSPB3Q12988 150 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 SRSF5Q13243 272 aaKnown RBP13.03□□□□□ -0.32
TPM1-215ENST00000558868 ATP6AP1Q15904 470 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 ZNF528Q3MIS6 628 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 TCTE1Q5JU00 501 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 GARNL3Q5VVW2 1013 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 FAM92BQ6ZTR7 304 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 ZNF551Q7Z340 670 aaPredicted RBP13.03□□□□□ -0.32
TPM1-215ENST00000558868 PTOV1Q86YD1 416 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 PDSS2Q86YH6 399 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 SLC35F3Q8IY50 421 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 FBXO30Q8TB52 745 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 NCSTNQ92542 709 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 SLC47A1Q96FL8 570 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 PYURFQ96I23 114 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 TGM7Q96PF1 710 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 BDH2Q9BUT1 245 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 ASPSCR1Q9BZE9 553 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 GLIPR2Q9H4G4 154 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 EPS8L2Q9H6S3 715 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 ANKHQ9HCJ1 492 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 SLAMF7Q9NQ25 335 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 KCMF1Q9P0J7 381 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 CES1P1Q9UKY3 287 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 DAPP1Q9UN19 280 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 TP53BP1Q12888 1972 aaPredicted RBP13.03□□□□□ -0.32
TPM1-215ENST00000558868 IGHV1OR21-1A0A087WYE8 117 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 BLACEA4D250 179 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 TMEM247A6NEH6 219 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 PGRMC2O15173 223 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 GALR3O60755 368 aaPredicted RBP13.02□□□□□ -0.33
TPM1-215ENST00000558868 PRAMEF10O60809 474 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 TNFRSF21O75509 655 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 CCT3P49368 545 aaKnown RBP13.02□□□□□ -0.33
TPM1-215ENST00000558868 ARL4DP49703 201 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 CCT8P50990 548 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 MVDP53602 400 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 LIM2P55344 173 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 DSTNP60981 165 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 SHBQ15464 509 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 CEBPEQ15744 281 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 ADRM1Q16186 407 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 LRRC36Q1X8D7 754 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 PRTGQ2VWP7 1150 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 C18orf63Q68DL7 685 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 C6orf120Q7Z4R8 191 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 RNF130Q86XS8 419 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 CLEC4FQ8N1N0 589 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 C10orf111Q8N326 155 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 METTL25Q8N6Q8 603 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 OR4K14Q8NGD5 310 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 OR56A1Q8NGH5 318 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 ADAMTS18Q8TE60 1221 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 N4BP2L2Q92802 583 aaPredicted RBP13.02□□□□□ -0.33
TPM1-215ENST00000558868 NAF1Q96HR8 494 aaKnown RBP13.02□□□□□ -0.33
TPM1-215ENST00000558868 BTBD9Q96Q07 612 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 C9orf16Q9BUW7 83 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 TRIM4Q9C037 500 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 Q9H521 79 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 C3orf14Q9HBI5 128 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 FAM60AQ9NP50 221 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 TMEM74BQ9NUR3 256 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 SOHLH2Q9NX45 425 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 ADPRHL2Q9NX46 363 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 C5AR2Q9P296 337 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 ANGPT4Q9Y264 503 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 LRCH1Q9Y2L9 728 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 ZNF451Q9Y4E5 1061 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 MAP4K5Q9Y4K4 846 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 GON4LQ3T8J9 2241 aa13.02□□□□□ -0.33
TPM1-215ENST00000558868 CACNA1IQ9P0X4 2223 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 GLOD5A6NK44 160 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 CLOCKO15516 846 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 TPST1O60507 370 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 PRKD3O94806 890 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 ARAFP10398 606 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 ETFAP13804 333 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 CDK9P50750 372 aaKnown RBP13.01□□□□□ -0.33
TPM1-215ENST00000558868 EMP3P54852 163 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 OR1D5P58170 312 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 PRR5P85299 388 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 RUNX2Q13950 521 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 SCARB2Q14108 478 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 NR0B2Q15466 257 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 LRRC23Q53EV4 343 aaPredicted RBP13.01□□□□□ -0.33
TPM1-215ENST00000558868 TMTC4Q5T4D3 741 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 HMBOX1Q6NT76 420 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 EIF3MQ7L2H7 374 aaKnown RBP13.01□□□□□ -0.33
TPM1-215ENST00000558868 AMIGO2Q86SJ2 522 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 KMT5CQ86Y97 462 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 TMEM105Q8N8V8 129 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 OR5AK3PQ8NH89 298 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 TANKQ92844 425 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 ZNF285Q96NJ3 590 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 SEMA6AQ9H2E6 1030 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 A4GALTQ9NPC4 353 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 SIRT3Q9NTG7 399 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms