RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 TEX10Q9NXF1 929 aaPredicted RBP14.04□□□□□ -0.16
RNF4-210ENST00000508235 RAP2CQ9Y3L5 183 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 PCDHA9Q9Y5H5 950 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 CLDN16Q9Y5I7 305 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 ZFHX4Q86UP3 3567 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 UQCRHLA0A096LP55 91 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 FGF17O60258 216 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 SEC22BO75396 215 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 GPR75O95800 540 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 LINC00032P0C843 101 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 DRD2P14416 443 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 TNNI3P19429 210 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 BGNP21810 368 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 WDR4P57081 412 aaKnown RBP14.03□□□□□ -0.16
RNF4-210ENST00000508235 ZNF763Q0D2J5 394 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 HEPACAMQ14CZ8 416 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 NR6A1Q15406 480 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 UGT3A2Q3SY77 523 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 FAM219BQ5XKK7 198 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 IGFL3Q6UXB1 125 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 ZADH2Q8N4Q0 377 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 SLC5A8Q8N695 610 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 MORN4Q8NDC4 146 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 B3GNT7Q8NFL0 401 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 OR4K14Q8NGD5 310 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 OR14A16Q8NHC5 309 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 DNAJB14Q8TBM8 379 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 BRIX1Q8TDN6 353 aaKnown RBP14.03□□□□□ -0.16
RNF4-210ENST00000508235 TM4SF18Q96CE8 201 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 C11orf24Q96F05 449 aaPredicted RBP14.03□□□□□ -0.16
RNF4-210ENST00000508235 LRTM1Q9HBL6 345 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 PTGFRNQ9P2B2 879 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 ZDHHC2Q9UIJ5 367 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 PPIEQ9UNP9 301 aaKnown RBP14.03□□□□□ -0.16
RNF4-210ENST00000508235 WBP11Q9Y2W2 641 aaKnown RBP14.03□□□□□ -0.16
RNF4-210ENST00000508235 TMED5Q9Y3A6 229 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 CCL27Q9Y4X3 112 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 TNRC6AQ8NDV7 1962 aaKnown RBP14.03□□□□□ -0.16
RNF4-210ENST00000508235 MGAQ8IWI9 3026 aa14.03□□□□□ -0.16
RNF4-210ENST00000508235 GLOD5A6NK44 160 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 A8MUA0 341 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 TGFBR3LH3BV60 316 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 ITM2AO43736 263 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 OR10H2O60403 315 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 ANXA4P09525 319 aaPredicted RBP14.02□□□□□ -0.17
RNF4-210ENST00000508235 ITGAMP11215 1152 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 ALOX15P16050 662 aaPredicted RBP14.02□□□□□ -0.17
RNF4-210ENST00000508235 GALNSP34059 522 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 STT3AP46977 705 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 RPL14P50914 215 aaKnown RBP14.02□□□□□ -0.17
RNF4-210ENST00000508235 CLCN2P51788 898 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 RAE1P78406 368 aaKnown RBP14.02□□□□□ -0.17
RNF4-210ENST00000508235 KLRB1Q12918 225 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 NFATC3Q12968 1075 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 MFAP5Q13361 173 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 TTMPQ5BVD1 217 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 SLC48A1Q6P1K1 146 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 SAMD14Q8IZD0 417 aaPredicted RBP14.02□□□□□ -0.17
RNF4-210ENST00000508235 ST13P4Q8IZP2 240 aaPredicted RBP14.02□□□□□ -0.17
RNF4-210ENST00000508235 NFAM1Q8NET5 270 aaPredicted RBP14.02□□□□□ -0.17
RNF4-210ENST00000508235 ELP5Q8TE02 316 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 VMP1Q96GC9 406 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 ART5Q96L15 291 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 PPP3R2Q96LZ3 170 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 SEMA4CQ9C0C4 833 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 TUBB1Q9H4B7 451 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 THAP1Q9NVV9 213 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 ABI3Q9P2A4 366 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 RALYQ9UKM9 306 aaKnown RBP14.02□□□□□ -0.17
RNF4-210ENST00000508235 LOC400499M0QZD8 3231 aa14.02□□□□□ -0.17
RNF4-210ENST00000508235 CPAMD8Q8IZJ3 1885 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 CACNA1GO43497 2377 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 C17orf105B2RV13 164 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 TMEM233B4DJY2 109 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 CDK2AP1O14519 115 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 PIP5K1BO14986 540 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 PRKRAO75569 313 aaKnown RBP14.01□□□□□ -0.17
RNF4-210ENST00000508235 LYPLA1O75608 230 aaPredicted RBP14.01□□□□□ -0.17
RNF4-210ENST00000508235 PDGFAP04085 211 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 CELA2AP08217 269 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 SLC35E2P0CK97 266 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 MAPK1P28482 360 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 ARRB2P32121 409 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 ALDH9A1P49189 494 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 ID2Q02363 134 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 BST1Q10588 318 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 ABHD17BQ5VST6 288 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 NOXRED1Q6NXP6 359 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 H3F3CQ6NXT2 135 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 IGFL2Q6UWQ7 119 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 Q6ZSR9 355 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 IKBIPQ70UQ0 350 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 OR4N5Q8IXE1 308 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 LGI4Q8N135 537 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 SIRT6Q8N6T7 355 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 TEX19Q8NA77 164 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 C16orf78Q8WTQ4 265 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 PTPMT1Q8WUK0 201 aaPredicted RBP14.01□□□□□ -0.17
RNF4-210ENST00000508235 PSMF1Q92530 271 aa14.01□□□□□ -0.17
RNF4-210ENST00000508235 ZNF354BQ96LW1 612 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms