RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TRBV4-1A0A0J9YWV2 114 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 PRR23AA6NEV1 266 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 SLC30A4O14863 429 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 C6orf47O95873 294 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 CLEC2LP0C7M8 214 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 CCND3P30281 292 aaPredicted RBP16.91■□□□□ 0.3
NUP54-205ENST00000507257 CA8P35219 290 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 WNT4P56705 351 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 DDX39BQ13838 428 aaKnown RBP16.91■□□□□ 0.3
NUP54-205ENST00000507257 ATP13A5Q4VNC0 1218 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 CD300LDQ6UXZ3 194 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 SLC24A5Q71RS6 500 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 METTL3Q86U44 580 aaKnown RBP16.91■□□□□ 0.3
NUP54-205ENST00000507257 TMC8Q8IU68 726 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 FAM217AQ8IXS0 508 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 SLC38A6Q8IZM9 456 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 Q8N402 240 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 OR7G3Q8NG95 312 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 SKA2Q8WVK7 121 aaPredicted RBP16.91■□□□□ 0.3
NUP54-205ENST00000507257 CREB3L1Q96BA8 519 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 QRFPRQ96P65 431 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 WRAP53Q9BUR4 548 aaKnown RBP16.91■□□□□ 0.3
NUP54-205ENST00000507257 TM6SF2Q9BZW4 377 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 NT5DC2Q9H857 520 aa16.91■□□□□ 0.3
NUP54-205ENST00000507257 FGF20Q9NP95 211 aaPredicted RBP16.91■□□□□ 0.3
NUP54-205ENST00000507257 EIF3KQ9UBQ5 218 aaKnown RBP16.91■□□□□ 0.3
NUP54-205ENST00000507257 FAM240BA0A1B0GVZ2 78 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 GNG14A0A1W2PPG7 69 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 OR5K3A6NET4 321 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 H7C4K7 107 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 FURINP09958 794 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 PSKH1P11801 424 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 ARSBP15848 533 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 ELAVL4P26378 380 aaKnown RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 ABATP80404 500 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 PUM1Q14671 1186 aaKnown RBP eCLIP16.9■□□□□ 0.3
NUP54-205ENST00000507257 SF1Q15637 639 aaKnown RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 WSCD2Q2TBF2 565 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 CDONQ4KMG0 1287 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 KLHL22Q53GT1 634 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 DCST1Q5T197 706 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 CRTC1Q6UUV9 634 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 RSPO2Q6UXX9 243 aaPredicted RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 CEACAM20Q6UY09 585 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 DNAJB7Q7Z6W7 309 aaPredicted RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 GHDCQ8N2G8 530 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 FGF11Q92914 225 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 DCLRE1CQ96SD1 692 aaKnown RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 FUZQ9BT04 418 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 KLF16Q9BXK1 252 aaPredicted RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 ZSCAN32Q9NX65 697 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 PTTG3PQ9NZH4 202 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 PSIP1O75475 530 aaKnown RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 NR2F6P10588 404 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 UBL4AP11441 157 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 POLR2CP19387 275 aaPredicted RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 APEX1P27695 318 aaKnown RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 GABRA5P31644 462 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 CSKP41240 450 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 EVX1P49640 407 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 LIM2P55344 173 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 SMIM11AP58511 58 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 COX10Q12887 443 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 SEC23BQ15437 767 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 NDUFA9Q16795 377 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 SLC5A12Q1EHB4 618 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 ZBTB37Q5TC79 503 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 REEP3Q6NUK4 255 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 TRILQ7L0X0 811 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 TSPAN33Q86UF1 283 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 C9orf62Q8N4C0 152 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 TP53I13Q8NBR0 393 aaPredicted RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 AKAP1Q92667 903 aaKnown RBP eCLIP16.9■□□□□ 0.3
NUP54-205ENST00000507257 UPRTQ96BW1 309 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 SCRN2Q96FV2 425 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 PDXPQ96GD0 296 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 MAP6Q96JE9 813 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 C2orf49Q9BVC5 232 aaPredicted RBP16.9■□□□□ 0.3
NUP54-205ENST00000507257 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.9■□□□□ 0.37e-10■■■■■ 34.7
NUP54-205ENST00000507257 MYNNQ9NPC7 610 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 ACAD8Q9UKU7 415 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 HSPB11Q9Y547 144 aa16.9■□□□□ 0.3
NUP54-205ENST00000507257 TRDV1A0A1B0GX56 115 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 NPIPB15A6NHN6 443 aaPredicted RBP16.89■□□□□ 0.29
NUP54-205ENST00000507257 WASHC1A8K0Z3 465 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 AKR7A2O43488 359 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 TBL1XO60907 577 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 SLCO2B1O94956 709 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 HK1P19367 917 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 SERPINA4P29622 427 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 DSTNP60981 165 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 EFNB1P98172 346 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 MRPL28Q13084 256 aaKnown RBP16.89■□□□□ 0.29
NUP54-205ENST00000507257 LEXMQ3ZCV2 418 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 FLYWCH1Q4VC44 716 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 BICRALQ6AI39 1079 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 CNIH2Q6PI25 160 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 DEFB132Q7Z7B7 95 aa16.89■□□□□ 0.29
NUP54-205ENST00000507257 RTN4RL1Q86UN2 441 aaPredicted RBP16.89■□□□□ 0.29
NUP54-205ENST00000507257 PDZD3Q86UT5 571 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms