RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 NUDT13Q86X67 352 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 TMEM178AQ8NBL3 297 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 OR14A16Q8NHC5 309 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 SLC2A12Q8TD20 617 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 TRPC4APQ8TEL6 797 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 TANKQ92844 425 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 DAZLQ92904 295 aaKnown RBP12□□□□□ -0.49
HDAC1-209ENST00000484305 PPWD1Q96BP3 646 aaKnown RBP12□□□□□ -0.49
HDAC1-209ENST00000484305 TMEM237Q96Q45 408 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 SERPINI1Q99574 410 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 MRPL1Q9BYD6 325 aaKnown RBP12□□□□□ -0.49
HDAC1-209ENST00000484305 OR8D2Q9GZM6 311 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 ASPDHA6ND91 283 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 WIPF3A6NGB9 483 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 SMIM23A6NLE4 172 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 LRRTM2O43300 516 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 NME2P1O60361 137 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 OR2J2O76002 312 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 ZFAND5O76080 213 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 SUPT7LO94864 414 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 SEMA3DO95025 777 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 UNC5CO95185 931 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 AIFM1O95831 613 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 LDLRP01130 860 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 KLK1P06870 262 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 GSTA1P08263 222 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 IMPDH1P20839 514 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 NME2P22392 152 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 ATP5F1P24539 256 aaPredicted RBP11.99□□□□□ -0.49
HDAC1-209ENST00000484305 BUD31P41223 144 aaPredicted RBP11.99□□□□□ -0.49
HDAC1-209ENST00000484305 SLCO1A2P46721 670 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 STT3AP46977 705 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 IFT88Q13099 833 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 C10orf62Q5T681 223 aaPredicted RBP11.99□□□□□ -0.49
HDAC1-209ENST00000484305 GFRALQ6UXV0 394 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 HSDL2Q6YN16 418 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.99□□□□□ -0.49
HDAC1-209ENST00000484305 TMEM156Q8N614 296 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 ZNF721Q8TF20 911 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 FRMD6Q96NE9 622 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 DGAT2Q96PD7 388 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 ELOVL6Q9H5J4 265 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 MYOTQ9UBF9 498 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 TRPS1Q9UHF7 1281 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 DCDC2Q9UHG0 476 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 EMCNQ9ULC0 261 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 YARS2Q9Y2Z4 477 aaKnown RBP11.99□□□□□ -0.49
HDAC1-209ENST00000484305 MYO7BQ6PIF6 2116 aa11.99□□□□□ -0.49
HDAC1-209ENST00000484305 GTF3C1Q12789 2109 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 CROCCQ5TZA2 2017 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 HRKO00198 91 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 WWP2O00308 870 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 PGRMC2O15173 223 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 GPR75O95800 540 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 NR2F6P10588 404 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 GP1BBP13224 206 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 COX7A2P14406 83 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 SSR4P51571 173 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 HK2P52789 917 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 PRKAA2P54646 552 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 RNF4P78317 190 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 BIKQ13323 160 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 C4orf17Q53FE4 359 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 TCHHL1Q5QJ38 904 aaPredicted RBP11.98□□□□□ -0.49
HDAC1-209ENST00000484305 MDGA2Q7Z553 956 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 TDRPQ86YL5 185 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 SLC22A9Q8IVM8 553 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 METTL4Q8N3J2 472 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 CPSF7Q8N684 471 aaKnown RBP11.98□□□□□ -0.49
HDAC1-209ENST00000484305 CDYL2Q8N8U2 506 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 MYRIPQ8NFW9 859 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 EPS8L3Q8TE67 593 aaKnown RBP11.98□□□□□ -0.49
HDAC1-209ENST00000484305 DOK4Q8TEW6 326 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 SELENOMQ8WWX9 145 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.98□□□□□ -0.49
HDAC1-209ENST00000484305 TMEM125Q96AQ2 219 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 L3HYPDHQ96EM0 354 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 RBM18Q96H35 190 aaKnown RBP11.98□□□□□ -0.49
HDAC1-209ENST00000484305 SENP5Q96HI0 755 aaPredicted RBP11.98□□□□□ -0.49
HDAC1-209ENST00000484305 HBEGFQ99075 208 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 TSPAN10Q9H1Z9 355 aaPredicted RBP11.98□□□□□ -0.49
HDAC1-209ENST00000484305 TEX10Q9NXF1 929 aaPredicted RBP11.98□□□□□ -0.49
HDAC1-209ENST00000484305 SEC14L3Q9UDX4 400 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 SNX6Q9UNH7 406 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 SLC12A4Q9UP95 1085 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 DOPEY1Q5JWR5 2465 aa11.98□□□□□ -0.49
HDAC1-209ENST00000484305 A0A1W2PS29 197 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 ARHGAP10A1A4S6 786 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 A1L4Q6 167 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 G3V2L1 256 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 MANBAO00462 879 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 IGKV3-11P04433 115 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 STSP08842 583 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 ALOX15P16050 662 aaPredicted RBP11.97□□□□□ -0.49
HDAC1-209ENST00000484305 KRT15P19012 456 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 PLIN5Q00G26 463 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 ALDH6A1Q02252 535 aaKnown RBP11.97□□□□□ -0.49
HDAC1-209ENST00000484305 GALNT1Q10472 559 aaPredicted RBP11.97□□□□□ -0.49
HDAC1-209ENST00000484305 RASA2Q15283 850 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 RNFT1Q5M7Z0 435 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms