RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CEP63Q96MT8 703 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 CEP41Q9BYV8 373 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 OR10A4Q9H209 315 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 TCF7L1Q9HCS4 588 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 PALMDQ9NP74 551 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 MYOZ1Q9NP98 299 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-206ENST00000471968 UTP6Q9NYH9 597 aaKnown RBP5.84□□□□□ -1.47
HDAC3-206ENST00000471968 CNIH4Q9P003 139 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 RSPH14Q9UHP6 348 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 CNOT11Q9UKZ1 510 aaKnown RBP5.84□□□□□ -1.47
HDAC3-206ENST00000471968 DLGAP4Q9Y2H0 992 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 ARL5AQ9Y689 179 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 CHCHD2Q9Y6H1 151 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-206ENST00000471968 AGAP14A8MT82 685 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PIP5K1CO60331 668 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 AVILO75366 819 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 STAMBPO95630 424 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 KRT1P04264 644 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 GAAP10253 952 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PAMP19021 973 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PSMB1P20618 241 aaKnown RBP5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PSMA2P25787 234 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 MIPP30301 263 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 FOXN2P32314 431 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 CDKN1CP49918 316 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-206ENST00000471968 GSCP56915 257 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-206ENST00000471968 RNF4P78317 190 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 CHRNB3Q05901 458 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PPIDQ08752 370 aaKnown RBP5.83□□□□□ -1.48
HDAC3-206ENST00000471968 FUT7Q11130 342 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 ASPHQ12797 758 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 TSTA3Q13630 321 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PKP1Q13835 747 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 FGFBP1Q14512 234 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 TSC22D1Q15714 1073 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PHKG1Q16816 387 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 CCSMST1Q4G0I0 132 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 SIRPB2Q5JXA9 342 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 ZNF425Q6IV72 752 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 ADAMTSL5Q6ZMM2 481 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 DOK3Q7L591 496 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 CHMP1BQ7LBR1 199 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 VN1R4Q7Z5H5 301 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PSTKQ8IV42 348 aaKnown RBP5.83□□□□□ -1.48
HDAC3-206ENST00000471968 VRK3Q8IV63 474 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 TRIM42Q8IWZ5 723 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 ZNF321PQ8N8H1 164 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 STEAP2Q8NFT2 490 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 OR4K2Q8NGD2 314 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 OR4F5Q8NH21 305 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 NANPQ8TBE9 248 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PIWIL2Q8TC59 973 aaKnown RBP5.83□□□□□ -1.48
HDAC3-206ENST00000471968 FIG4Q92562 907 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 FATE1Q969F0 183 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 SPACA9Q96E40 222 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PKP4Q99569 1192 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 B9D2Q9BPU9 175 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 FANCFQ9NPI8 374 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 ZDHHC3Q9NYG2 299 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 HACD3Q9P035 362 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 WHRNQ9P202 907 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 IMPACTQ9P2X3 320 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 IKBKGQ9Y6K9 419 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 PRSS21Q9Y6M0 314 aa5.83□□□□□ -1.48
HDAC3-206ENST00000471968 IGLV3-16A0A075B6K0 115 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 TCRBV5S1A1TA0A578 114 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 GOLGA8MH3BSY2 632 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 PJA2O43164 708 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 LIASO43766 372 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 B3GALT4O96024 378 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 FTH1P02794 183 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 ITGALP20701 1170 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 RPA3P35244 121 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-206ENST00000471968 NSFP46459 744 aaKnown RBP5.82□□□□□ -1.48
HDAC3-206ENST00000471968 BDKRB1P46663 353 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 LHX2P50458 406 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 RAG2P55895 527 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 XIAPP98170 497 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 ZP4Q12836 540 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 P2RY6Q15077 328 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 SLC9A3R2Q15599 337 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 DPYSL2Q16555 572 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 EXOC3L4Q17RC7 722 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 TOR1AIP1Q5JTV8 583 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 CCDC122Q5T0U0 273 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 MEI1Q5TIA1 1274 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 FNDC7Q5VTL7 733 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 ERICH6BQ5W0A0 696 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 BICRALQ6AI39 1079 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 TTC23LQ6PF05 361 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 FIGNL1Q6PIW4 674 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 ZNF793Q6ZN11 406 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 GBP6Q6ZN66 633 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 MICALCLQ6ZW33 695 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 FAM214BQ7L5A3 538 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 SNX20Q7Z614 316 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 CCDC25Q86WR0 208 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 NOA1Q8NC60 698 aaKnown RBP5.82□□□□□ -1.48
HDAC3-206ENST00000471968 CCNYQ8ND76 341 aa5.82□□□□□ -1.48
HDAC3-206ENST00000471968 OR5L2Q8NGL0 311 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms