RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	CROCCP2	Q86T23	111 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	TMEM52	Q8NDY8	209 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	RELT	Q969Z4	430 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	PAIP2	Q9BPZ3	127 aa	Known RBP	11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	TMEM109	Q9BVC6	243 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	WDR41	Q9HAD4	459 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	KCNK13	Q9HB14	408 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	LYRM4	Q9HD34	91 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	NECTIN3	Q9NQS3	549 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	OXSM	Q9NWU1	459 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	NMRK1	Q9NWW6	199 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	MKS1	Q9NXB0	559 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	TEKT2	Q9UIF3	430 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	OSGIN2	Q9Y236	505 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	MMACHC	Q9Y4U1	282 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	ABCA12	Q86UK0	2595 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	WDR91	A4D1P6	747 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	LRRTM2	O43300	516 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	CTIF	O43310	598 aa	Known RBP	11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	PRAMEF2	O60811	474 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	TRIM13	O60858	407 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	LDB3	O75112	727 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	ULK1	O75385	1050 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	EED	O75530	441 aa	Known RBP	11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	PRKRA	O75569	313 aa	Known RBP	11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	MYO1D	O94832	1006 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	ESRRB	O95718	433 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	F10	P00742	488 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	ENO1	P06733	434 aa	Known RBP	11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	KLK1	P06870	262 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	NR2F6	P10588	404 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	ALDH3A1	P30838	453 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	HTR6	P50406	440 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	HSD17B7	P56937	341 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	TAS2R50	P59544	299 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	NAA20	P61599	178 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	TNFRSF17	Q02223	184 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	ZNF33B	Q06732	778 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	CUL3	Q13618	768 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	EXT1	Q16394	746 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	SPDYA	Q5MJ70	313 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	CCNYL2	Q5T2Q4	361 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	C10orf62	Q5T681	223 aa	Predicted RBP	11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	LRIG3	Q6UXM1	1119 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	ZCCHC23	Q6ZST2	131 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	GPR180	Q86V85	440 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	ZNF595	Q8IYB9	648 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	LGI4	Q8N135	537 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	AMER2	Q8N7J2	671 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	ANKRD42	Q8N9B4	389 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	DNAJB8	Q8NHS0	232 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	CDC26	Q8NHZ8	85 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	M1AP	Q8TC57	530 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	AGR3	Q8TD06	166 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	AGAP11	Q8TF27	550 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	NPAS2	Q99743	824 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	STMN4	Q9H169	189 aa	Predicted RBP	11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	MMP25	Q9NPA2	562 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	LYAR	Q9NX58	379 aa	Known RBP	11.88	□□□□□ -0.51
FDPS-204	ENST00000461507	TSC22D4	Q9Y3Q8	395 aa		11.88	□□□□□ -0.51
FDPS-204	ENST00000461507		A0A1B0GUH1	482 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	GLOD5	A6NK44	160 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	CDK2AP1	O14519	115 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	SEMA3D	O95025	777 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	CRYAB	P02511	175 aa	Known RBP	11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	FAM58BP	P0C7Q3	252 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	PPP2R1B	P30154	601 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	MAPK12	P53778	367 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	HNRNPH2	P55795	449 aa	Known RBP	11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	DNAJB13	P59910	316 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	ACER2	Q5QJU3	275 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	C18orf63	Q68DL7	685 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	FCRLB	Q6BAA4	426 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	ZNF787	Q6DD87	383 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	OR4N5	Q8IXE1	308 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	C1orf52	Q8N6N3	182 aa	Known RBP	11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	MDS2	Q8NDY4	140 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	MYRIP	Q8NFW9	859 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	PKNOX2	Q96KN3	472 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	ZNF354B	Q96LW1	612 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	GATA5	Q9BWX5	397 aa	Predicted RBP	11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.87	□□□□□ -0.51	4e-9	■■■■□ 21.1
FDPS-204	ENST00000461507	RPF2	Q9H7B2	306 aa	Known RBP	11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	MS4A12	Q9NXJ0	267 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	ZNF225	Q9UK10	706 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	MYO7B	Q6PIF6	2116 aa		11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	NCOA6	Q14686	2063 aa	Predicted RBP	11.87	□□□□□ -0.51
FDPS-204	ENST00000461507	IGKV3D-11	A0A0A0MRZ8	115 aa		11.86	□□□□□ -0.51
FDPS-204	ENST00000461507		A0A0A6YYD5	115 aa		11.86	□□□□□ -0.51
FDPS-204	ENST00000461507	GNG14	A0A1W2PPG7	69 aa		11.86	□□□□□ -0.51
FDPS-204	ENST00000461507	TCRBV16S1A1N1	A0A5B0	115 aa		11.86	□□□□□ -0.51
FDPS-204	ENST00000461507	SAGE2P	A6NJ88	616 aa		11.86	□□□□□ -0.51
FDPS-204	ENST00000461507	CYR61	O00622	381 aa		11.86	□□□□□ -0.51
FDPS-204	ENST00000461507	UBFD1	O14562	309 aa	Known RBP	11.86	□□□□□ -0.51
FDPS-204	ENST00000461507	TMPRSS11D	O60235	418 aa		11.86	□□□□□ -0.51
FDPS-204	ENST00000461507	OR10H2	O60403	315 aa		11.86	□□□□□ -0.51
FDPS-204	ENST00000461507	CHEK2	O96017	543 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms