RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CYP4A22Q5TCH4 519 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 C9orf57Q5W0N0 161 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 SPOPLQ6IQ16 392 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 PPP1R2P3Q6NXS1 205 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 TTC27Q6P3X3 843 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 STXBP4Q6ZWJ1 553 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 AKAP14Q86UN6 197 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 HORMAD1Q86X24 394 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 CRLF3Q8IUI8 442 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 MMAAQ8IVH4 418 aaKnown RBP4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZNF595Q8IYB9 648 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 MAML2Q8IZL2 1156 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 CENPSQ8N2Z9 138 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 KIAA0895Q8NCT3 520 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR7G1Q8NGA0 311 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR2AJ1Q8NGZ0 328 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 TRUB1Q8WWH5 349 aaKnown RBP4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 ATL1Q8WXF7 558 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 SEMA4DQ92854 862 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 MTERF3Q96E29 417 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 IGSF21Q96ID5 467 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 PLEKHA8Q96JA3 519 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 MARK4Q96L34 752 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 CEP19Q96LK0 163 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 LINC00615Q96LM1 132 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 PANX3Q96QZ0 392 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 CTRCQ99895 268 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 PSD2Q9BQI7 771 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 THTPAQ9BU02 230 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 SLC25A23Q9BV35 468 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 NUP85Q9BW27 656 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 GCOM2Q9BZD3 368 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 SHCBP1LQ9BZQ2 653 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR2B2Q9GZK3 357 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 WNT5BQ9H1J7 359 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 DPAGT1Q9H3H5 408 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 LRRC19Q9H756 370 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 RMND5AQ9H871 391 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 VPS37BQ9H9H4 285 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 C12orf10Q9HB07 376 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 DNAJC17Q9NVM6 304 aaKnown RBP4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 MIOSQ9NXC5 875 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 NPAP1Q9NZP6 1156 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 RHCGQ9UBD6 479 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 TBK1Q9UHD2 729 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 SLC7A8Q9UHI5 535 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 APPL1Q9UKG1 709 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 RALYQ9UKM9 306 aaKnown RBP4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 ITGA11Q9UKX5 1188 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 TAF1LQ8IZX4 1826 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 MEGF6O75095 1541 aa4.16□□□□□ -1.74
HMGB1P16-201ENST00000447155 MYH9P35579 1960 aaKnown RBP4.15□□□□□ -1.74
HMGB1P16-201ENST00000447155 ARHGEF37A1IGU5 675 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 ILVBLA1L0T0 632 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 LRRIQ4A6NIV6 560 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 RNF103O00237 685 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 AQP9O43315 295 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 XRCC3O43542 346 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC28A2O43868 658 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 SNAP91O60641 907 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLCO2B1O94956 709 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 OR6B1O95007 311 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 HSPA4LO95757 839 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 TFAP2AP05549 437 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 KRT8P05787 483 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 IGKV5-2P06315 115 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 DANCRP0C864 163 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 DLATP10515 647 aaKnown RBP4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 MYL2P10916 166 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 P4HA1P13674 534 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 CSF2RAP15509 400 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 ERCC2P18074 760 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 AOC1P19801 751 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 M6PRP20645 277 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 CCNCP24863 283 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 FOXN2P32314 431 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 PCGF2P35227 344 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 MTHFRP42898 656 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 THOP1P52888 689 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 VCPP55072 806 aaKnown RBP4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 YWHAGP61981 247 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 COASYQ13057 564 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 STX3Q13277 289 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 CAMK2DQ13557 499 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 FHL1Q13642 323 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 PTPRCAPQ14761 206 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 PHKG1Q16816 387 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZBED5Q49AG3 693 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 CAVIN4Q5BKX8 364 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 TCHHL1Q5QJ38 904 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 LGSNQ5TDP6 509 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 AGAP7PQ5VUJ5 663 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLX4IPQ5VYV7 408 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 FAM171BQ6P995 826 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 FAM198BQ6UWH4 519 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 HDDC2Q7Z4H3 204 aa4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 CENPVQ7Z7K6 275 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 RBM23Q86U06 439 aaKnown RBP4.15□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC13A5Q86YT5 568 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms