RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 FAM109AQ8N4B1 249 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 CLEC4DQ8WXI8 215 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 TMEM74Q96NL1 305 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 ZNF416Q9BWM5 594 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 LIN28AQ9H9Z2 209 aaKnown RBP9.66□□□□□ -0.86
LINC00963-202ENST00000419300 CD9P21926 228 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 DHCR24Q15392 516 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 FAM110CQ1W6H9 321 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 SPANXN4Q5MJ08 99 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 PLAG1Q6DJT9 500 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 TMEM220Q6QAJ8 160 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 LRP10Q7Z4F1 713 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 CERS5Q8N5B7 392 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 FAM86B1Q8N7N1 296 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 HBEGFQ99075 208 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 SDHAF3Q9NRP4 125 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 INTS6Q9UL03 887 aaKnown RBP9.66□□□□□ -0.86
LINC00963-202ENST00000419300 CDC14AQ9UNH5 594 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 CACNG2Q9Y698 323 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 CLDN24A6NM45 220 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 AKT2P31751 481 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 ARF3P61204 181 aaPredicted RBP9.66□□□□□ -0.86
LINC00963-202ENST00000419300 ARF1P84077 181 aaKnown RBP9.66□□□□□ -0.86
LINC00963-202ENST00000419300 NPAS4Q8IUM7 802 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 MAPK15Q8TD08 544 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 KCTD12Q96CX2 325 aaKnown RBP9.66□□□□□ -0.86
LINC00963-202ENST00000419300 ZNF559Q9BR84 538 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 DPEP3Q9H4B8 488 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 SLC45A1Q9Y2W3 748 aa9.66□□□□□ -0.86
LINC00963-202ENST00000419300 COL5A3P25940 1745 aaPredicted RBP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 AGRPO00253 132 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 LYRM1O43325 122 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 OR1D2P34982 312 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 RBMXP38159 391 aaKnown RBP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 DGKQP52824 942 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 MEF2DQ14814 521 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 ARL6IP1Q15041 203 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 EML3Q32P44 896 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 INAVAQ3KP66 663 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 AGAP6Q5VW22 663 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 ARHGAP12Q8IWW6 846 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 OR1J4Q8NGS1 313 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 TRIM43Q96BQ3 446 aaPredicted RBP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 AGAP4Q96P64 663 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 AMBNQ9NP70 447 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 BIN3Q9NQY0 253 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 RXFP3Q9NSD7 469 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 AIG1Q9NVV5 245 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 RPH3AQ9Y2J0 694 aaPredicted RBP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 GREB1Q4ZG55 1949 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 HCKP08631 526 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 TIA1P31483 386 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 WNT4P56705 351 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 TAGLNQ01995 201 aaKnown RBP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 EXOC3L2Q2M3D2 409 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 ZNF691Q5VV52 312 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 C22orf42Q6IC83 251 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 ZNF101Q8IZC7 436 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 MFSD8Q8NHS3 518 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 ASB13Q8WXK3 278 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 SMPDL3AQ92484 453 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 IMP4Q96G21 291 aaKnown RBP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 TBL1XR1Q9BZK7 514 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 MAP10Q9P2G4 905 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 HS3ST4Q9Y661 456 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 PRAMEF11O60813 436 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 SCGB2A1O75556 95 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 RAB11BQ15907 218 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 WDR45BQ5MNZ6 344 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 GRHL3Q8TE85 626 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 OR2M2Q96R28 347 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 SERINC1Q9NRX5 453 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 TMEM39AQ9NV64 488 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 CPA4Q9UI42 421 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 DHDHQ9UQ10 334 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 SLC33A1O00400 549 aaPredicted RBP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 RASGRP1O95267 797 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 BMP1P13497 986 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 OXTRP30559 389 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 MLLT3P42568 568 aaPredicted RBP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 MTNR1AP48039 350 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 TMEM35AQ53FP2 167 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 C1orf52Q8N6N3 182 aaKnown RBP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 RNF121Q9H920 327 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 KDELR3O43731 214 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 APOC3P02656 99 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 IL32P24001 234 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 PTBP1P26599 531 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC00963-202ENST00000419300 PRMT2P55345 433 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 NTRK2Q16620 822 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 PPP1R3AQ16821 1122 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 FTMTQ8N4E7 242 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 NDNFQ8TB73 568 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 ERVK13-1Q9NX77 482 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 SH2B3Q9UQQ2 575 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 CEPT1Q9Y6K0 416 aa9.65□□□□□ -0.86
LINC00963-202ENST00000419300 KLK1P06870 262 aa9.65□□□□□ -0.87
LINC00963-202ENST00000419300 TYRP14679 529 aa9.65□□□□□ -0.87
LINC00963-202ENST00000419300 TCEA1P23193 301 aaKnown RBP9.65□□□□□ -0.87
LINC00963-202ENST00000419300 TARBP2Q15633 366 aaKnown RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms