RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 RD3Q7Z3Z2 195 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 UBE2Q1Q7Z7E8 422 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 CFAP206Q8IYR0 622 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 MMP21Q8N119 569 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 IL17RDQ8NFM7 739 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 RHEBL1Q8TAI7 183 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 KCTD13Q8WZ19 329 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 NMNAT1Q9HAN9 279 aaPredicted RBP8.43□□□□□ -1.06
RTN4-206ENST00000394611 SLC23A1Q9UHI7 598 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 NDRG2Q9UN36 371 aaKnown RBP8.43□□□□□ -1.06
RTN4-206ENST00000394611 M0R233 179 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 DSCR3O14972 297 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ZNF806P0C7X5 589 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 LIPCP11150 499 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 CKBP12277 381 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ANXA8P13928 327 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ADRA1AP35348 466 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 MRPS6P82932 125 aaKnown RBP8.43□□□□□ -1.06
RTN4-206ENST00000394611 PUDPQ08623 228 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 BEX5Q5H9J7 111 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 SYT6Q5T7P8 510 aaPredicted RBP8.43□□□□□ -1.06
RTN4-206ENST00000394611 ALG1LQ6GMV1 187 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 PM20D1Q6GTS8 502 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 SIGIRRQ6IA17 410 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 USP51Q70EK9 711 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 SLC46A3Q7Z3Q1 461 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ARRDC2Q8TBH0 407 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 AP3S1Q92572 193 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 UFD1Q92890 307 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 OR10A4Q9H209 315 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ACTL8Q9H568 366 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 NUP50Q9UKX7 468 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 SARDHQ9UL12 918 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 POFUT2Q9Y2G5 429 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ERVH48-1M5A8F1 160 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 FMO6PO60774 539 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 RASGRP1O95267 797 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 SIX6O95475 246 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 SAGP10523 405 aaPredicted RBP8.42□□□□□ -1.06
RTN4-206ENST00000394611 PPP2R1BP30154 601 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 CSKP41240 450 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 HCAR3P49019 387 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 RPS25P62851 125 aaKnown RBP8.42□□□□□ -1.06
RTN4-206ENST00000394611 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.42□□□□□ -1.062e-6■□□□□ 8.9
RTN4-206ENST00000394611 DOC2AQ14183 400 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 TOR2AQ5JU69 321 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 GARNL3Q5VVW2 1013 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 SLC30A6Q6NXT4 461 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 ANKRD33Q7Z3H0 272 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 PHYKPLQ8IUZ5 450 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.42□□□□□ -1.066e-6■□□□□ 8.7
RTN4-206ENST00000394611 CNTN4Q8IWV2 1026 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 NPAS3Q8IXF0 933 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 RIMKLAQ8IXN7 391 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 LILRA3Q8N6C8 439 aaPredicted RBP8.42□□□□□ -1.06
RTN4-206ENST00000394611 ARL14EPQ8N8R7 260 aaPredicted RBP8.42□□□□□ -1.06
RTN4-206ENST00000394611 OR4F15Q8NGB8 312 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 OR5D16Q8NGK9 328 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 C1orf74Q96LT6 269 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 P2RY13Q9BPV8 354 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 MCCC2Q9HCC0 563 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 ASF1AQ9Y294 204 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 CSNK1G3Q9Y6M4 447 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 A0A1W2PRB8 838 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 E7EQ34 232 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 J3QLW9 94 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 ZNF19P17023 458 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 JUNBP17275 347 aaPredicted RBP8.42□□□□□ -1.06
RTN4-206ENST00000394611 ITGA2P17301 1181 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 CCR6P51684 374 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 MTAPQ13126 283 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 IRF3Q14653 427 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 AGMOQ6ZNB7 445 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 C17orf107Q6ZR85 190 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 GPR149Q86SP6 731 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 UBQLNLQ8IYU4 475 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 TOMM5Q8N4H5 51 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 CRELD1Q96HD1 420 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 SCLYQ96I15 445 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 TSGA13Q96PP4 275 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 DOK1Q99704 481 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 FAIM2Q9BWQ8 316 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 TTLL2Q9BWV7 592 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 RNF32Q9H0A6 362 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 RSPH9Q9H1X1 276 aaPredicted RBP8.42□□□□□ -1.06
RTN4-206ENST00000394611 KCNH6Q9H252 994 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 TMEM184CQ9NVA4 438 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 FBXL12Q9NXK8 326 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 MLXQ9UH92 298 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 PPT2Q9UMR5 302 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 HCN4Q9Y3Q4 1203 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 KCNE2Q9Y6J6 123 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 TNFRSF10BO14763 440 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 PRMT3O60678 531 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 SPDEFO95238 335 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 GASTP01350 101 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 GYPBP06028 91 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 POU3F3P20264 500 aaPredicted RBP8.42□□□□□ -1.06
RTN4-206ENST00000394611 GPR4P46093 362 aa8.42□□□□□ -1.06
RTN4-206ENST00000394611 CRYBB1P53674 252 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms