RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 FGF11Q92914 225 aa17.56■□□□□ 0.4
TSSC4-201ENST00000333256 ANKRD9Q96BM1 317 aaPredicted RBP17.56■□□□□ 0.4
TSSC4-201ENST00000333256 PPCDCQ96CD2 204 aa17.56■□□□□ 0.4
TSSC4-201ENST00000333256 SAR1AQ9NR31 198 aa17.56■□□□□ 0.4
TSSC4-201ENST00000333256 C3orf18Q9UK00 162 aa17.56■□□□□ 0.4
TSSC4-201ENST00000333256 TCFL5Q9UL49 500 aa17.56■□□□□ 0.4
TSSC4-201ENST00000333256 WBP11Q9Y2W2 641 aaKnown RBP17.56■□□□□ 0.4
TSSC4-201ENST00000333256 FCHO1O14526 889 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 SLC22A3O75751 556 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 UMODP07911 640 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 EFNA1P20827 205 aaPredicted RBP17.55■□□□□ 0.4
TSSC4-201ENST00000333256 PTGER1P34995 402 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 HSD17B7P56937 341 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 CLN3Q13286 438 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 SQLEQ14534 574 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 PGS1Q32NB8 556 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 LANCL3Q6ZV70 420 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 SCUBE1Q8IWY4 988 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 TANKQ92844 425 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 GATA6Q92908 595 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 GPN2Q9H9Y4 310 aaPredicted RBP17.55■□□□□ 0.4
TSSC4-201ENST00000333256 CCDC167Q9P0B6 97 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 NXT1Q9UKK6 140 aaKnown RBP17.55■□□□□ 0.4
TSSC4-201ENST00000333256 CLDN16Q9Y5I7 305 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 C21orf140B9A014 251 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 CTNSO60931 367 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 RAB40ALP0C0E4 278 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 LAMP1P11279 417 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 LIFP15018 202 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 PTPN4P29074 926 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 PPP2R1BP30154 601 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 FEN1P39748 380 aaKnown RBP17.55■□□□□ 0.4
TSSC4-201ENST00000333256 FOLR3P41439 243 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 DGKQP52824 942 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 EMP2P54851 167 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 STX4Q12846 297 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 PDE7AQ13946 482 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 NSDHLQ15738 373 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 SPANXN4Q5MJ08 99 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 FAM9CQ8IZT9 166 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 CCDC197Q8NCU1 140 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 OR4K14Q8NGD5 310 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 OR2Y1Q8NGV0 311 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 CIDECQ96AQ7 238 aaPredicted RBP17.55■□□□□ 0.4
TSSC4-201ENST00000333256 CNRIP1Q96F85 164 aaPredicted RBP17.55■□□□□ 0.4
TSSC4-201ENST00000333256 CLMPQ9H6B4 373 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 CCDC86Q9H6F5 360 aaKnown RBP17.55■□□□□ 0.4
TSSC4-201ENST00000333256 PRDM9Q9NQV7 894 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 ZIM2Q9NZV7 527 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 PADI2Q9Y2J8 665 aa17.55■□□□□ 0.4
TSSC4-201ENST00000333256 PIK3R1P27986 724 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 ZFP36L2P47974 494 aaKnown RBP17.54■□□□□ 0.4
TSSC4-201ENST00000333256 ATP4BP51164 291 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 DUSP2Q05923 314 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 MPEG1Q2M385 716 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 FAM174BQ3ZCQ3 159 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 AGKQ53H12 422 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 QSOX2Q6ZRP7 698 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 FUNDC1Q8IVP5 155 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 KIAA1143Q96AT1 154 aaPredicted RBP17.54■□□□□ 0.4
TSSC4-201ENST00000333256 GPR87Q9BY21 358 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 ALOXE3Q9BYJ1 711 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 SLC35C2Q9NQQ7 365 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 EHD3Q9NZN3 535 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 ATP6V1HQ9UI12 483 aa17.54■□□□□ 0.4
TSSC4-201ENST00000333256 CCDC88CQ9P219 2028 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 IGKV3D-11A0A0A0MRZ8 115 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 GPR75O95800 540 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 XKP51811 444 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 C21orf58P58505 322 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 CPTPQ5TA50 214 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 OR4F3Q6IEY1 312 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 MED25Q71SY5 747 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 R3HCC1LQ7Z5L2 792 aaKnown RBP17.53■□□□□ 0.4
TSSC4-201ENST00000333256 CPSF7Q8N684 471 aaKnown RBP17.53■□□□□ 0.4
TSSC4-201ENST00000333256 DOK4Q8TEW6 326 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 KCNE4Q8WWG9 221 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 PPWD1Q96BP3 646 aaKnown RBP17.53■□□□□ 0.4
TSSC4-201ENST00000333256 C8orf44Q96CB5 159 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 ZBTB18Q99592 522 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 TMEM121BQ9BXQ6 578 aaPredicted RBP17.53■□□□□ 0.4
TSSC4-201ENST00000333256 PSME2Q9UL46 239 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 MMACHCQ9Y4U1 282 aa17.53■□□□□ 0.4
TSSC4-201ENST00000333256 IGHV3-20A0A0C4DH32 117 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 BLACEA4D250 179 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 C1QTNF9BB2RNN3 333 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 NR5A2O00482 541 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 CCDC22O60826 627 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 ALOX12BO75342 701 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 C1QTNF9P0C862 333 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 POLR2JP52435 117 aaKnown RBP17.52■□□□□ 0.4
TSSC4-201ENST00000333256 CLNS1AP54105 237 aaKnown RBP17.52■□□□□ 0.4
TSSC4-201ENST00000333256 GK5Q6ZS86 529 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 AMER2Q8N7J2 671 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 ZNF248Q8NDW4 579 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 VPS33AQ96AX1 596 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 TESCQ96BS2 214 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 MTERF3Q96E29 417 aa17.52■□□□□ 0.4
TSSC4-201ENST00000333256 PRPF18Q99633 342 aaKnown RBP17.52■□□□□ 0.4
TSSC4-201ENST00000333256 SLAMF7Q9NQ25 335 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms