RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 RNF170Q96K19 258 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 HHIPQ96QV1 700 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 OR51B5Q9H339 312 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 WDR26Q9H7D7 661 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 ACOT13Q9NPJ3 140 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 ATP13A2Q9NQ11 1180 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 ACOXLQ9NUZ1 547 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 RAPGEFL1Q9UHV5 662 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 HMX3A6NHT5 357 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 YY2O15391 372 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 MASP1P48740 699 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 CLK1P49759 484 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 BNC1Q01954 994 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 SRSF11Q05519 484 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 TARDBPQ13148 414 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 ENPP2Q13822 863 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 FGL2Q14314 439 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 DUOXA1Q1HG43 343 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 UNC5DQ6UXZ4 953 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 SPATC1Q76KD6 591 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 ZNF438Q7Z4V0 828 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 OR10Q1Q8NGQ4 319 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 SETD6Q8TBK2 473 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 CHTF18Q8WVB6 975 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 SLC38A4Q969I6 547 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 RAD51AP1Q96B01 352 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 REPS1Q96D71 796 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 EFCAB11Q9BUY7 163 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 CCDC32Q9BV29 185 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 CCDC59Q9P031 241 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 UTS2RQ9UKP6 389 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 ZFR2Q9UPR6 939 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 PEX16Q9Y5Y5 336 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 BCKDKO14874 412 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 NOBOXO60393 691 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 HOXB9P17482 250 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 KIR2DL1P43626 348 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 AP2S1P53680 142 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 WNT3P56703 355 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 GPR50Q13585 617 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 DGCR6Q14129 220 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 NKG7Q16617 165 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 SPIN4Q56A73 249 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 PRAMEF14Q5SWL7 426 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 IER5LQ5T953 404 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 PRAMEF13Q5VWM6 474 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 HIST2H2AA3Q6FI13 130 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 NXPE4Q6UWF7 544 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 ZNF551Q7Z340 670 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 OR14C36Q8NHC7 312 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 NETO1Q8TDF5 533 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 RPL3LQ92901 407 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 C6orf62Q9GZU0 229 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 NUAK2Q9H093 628 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 OSGEPL1Q9H4B0 414 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 PNMA8BQ9ULN7 279 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 ORC6Q9Y5N6 252 aa16.29■□□□□ 0.2
SHKBP1-205ENST00000594973 GABRR3A8MPY1 467 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 SCAMP2O15127 329 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 RGS10O43665 173 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 PCDH7O60245 1069 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 SEMA3DO95025 777 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 MAGP20916 626 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 MAT2AP31153 395 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 IL5RAQ01344 420 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 B3GNT8Q7Z7M8 397 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 NOXA1Q86UR1 476 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 DCUN1D3Q8IWE4 304 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 OR5K1Q8NHB7 308 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 CNIH3Q8TBE1 160 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 MYOCQ99972 504 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 S1PR5Q9H228 398 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 EHD3Q9NZN3 535 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 TRIOO75962 3097 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 OR2A25A4D2G3 310 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 FAM220BPB1ANY3 271 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 PI15O43692 258 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 PRMT3O60678 531 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 SCN2BO60939 215 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 CREG1O75629 220 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 SERPINA1P01009 418 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 CST1P01037 141 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 MT-ND2P03891 347 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 ACP5P13686 325 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 ENGP17813 658 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 KELP23276 732 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 GZMMP51124 257 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 CLCNKAP51800 687 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 CPTPQ5TA50 214 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 METRNLQ641Q3 311 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 ZNF776Q68DI1 518 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 COMMD6Q7Z4G1 85 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 CALHM3Q86XJ0 350 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 NLGN4XQ8N0W4 816 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 CADM2Q8N3J6 435 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 OR8J2Q8NGG1 315 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 MARVELD3Q96A59 401 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 SLC47A1Q96FL8 570 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 APOL4Q9BPW4 351 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 DUSP26Q9BV47 211 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms