RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 SLC26A5P58743 744 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 TBPL1P62380 186 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 IRF9Q00978 393 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 TSTA3Q13630 321 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 TGIF1Q15583 401 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 PTCHD3Q3KNS1 767 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 SPDYAQ5MJ70 313 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 SULT1C3Q6IMI6 304 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 ZNF425Q6IV72 752 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 CAPN13Q6MZZ7 669 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 PGBD2Q6P3X8 592 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 LCTLQ6UWM7 567 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 FRA10AC1Q70Z53 315 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 PAQR7Q86WK9 346 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 STX12Q86Y82 276 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 TDRPQ86YL5 185 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 GPSM1Q86YR5 675 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 MCATQ8IVS2 390 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 LRRC34Q8IZ02 419 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 ST13P4Q8IZP2 240 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 PLD6Q8N2A8 252 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 OR1L3Q8NH93 324 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 RHEBL1Q8TAI7 183 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 KCTD4Q8WVF5 259 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 KCNE4Q8WWG9 221 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 LRTOMTQ8WZ04 291 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 CAVIN3Q969G5 261 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 PYCR2Q96C36 320 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 TUBGCP3Q96CW5 907 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 MTBPQ96DY7 904 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 MED8Q96G25 268 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 ZNF285Q96NJ3 590 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 PRAP1Q96NZ9 151 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 OR4K3Q96R72 315 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 ATOH8Q96SQ7 321 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 EGFL8Q99944 293 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 BCL7BQ9BQE9 202 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 TMEM120AQ9BXJ8 343 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 ACPTQ9BZG2 426 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 SPRTNQ9H040 489 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 ALG9Q9H6U8 611 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 FANCEQ9HB96 536 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 SLC6A20Q9NP91 592 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 PFDN4Q9NQP4 134 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 TMEM184CQ9NVA4 438 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 OXSMQ9NWU1 459 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 RHBDL2Q9NX52 303 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 ANKMY1Q9P2S6 941 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 CGGBP1Q9UFW8 167 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 SNX7Q9UNH6 387 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 SLC22A14Q9Y267 594 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 TSC22D4Q9Y3Q8 395 aa5.97□□□□□ -1.45
ATPAF1-209ENST00000529214 NCF1BA6NI72 391 aaPredicted RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 ACOD1A6NK06 481 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 NOTOA8MTQ0 251 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 NCF1CA8MVU1 366 aaPredicted RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 E7EQ34 232 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 L7N2F9 121 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 AP3D1O14617 1153 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 MAGEB3O15480 346 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 KLK10O43240 276 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 EFSO43281 561 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 ZNF749O43361 778 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 NRP2O60462 931 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 RAD1O60671 282 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 KERAO60938 352 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 SCRG1O75711 98 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 OR2B3O76000 313 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 PLGP00747 810 aaPredicted RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 ALBP02768 609 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 NTRK1P04629 796 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 CTSBP07858 339 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 ABCB1P08183 1280 aaPredicted RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 RBP1P09455 135 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 NUDT17P0C025 328 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 FAM157BP0CG42 384 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 NCF1P14598 390 aaPredicted RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 H2AFXP16104 143 aaPredicted RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 GDF5P43026 501 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 SLC6A12P48065 614 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 MECP2P51608 486 aaKnown RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 ITGA1P56199 1179 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 WDR4P57081 412 aaKnown RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 CSNK1G2P78368 415 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 CDC16Q13042 620 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 ST3GAL2Q16842 350 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 DEFB110Q30KQ9 67 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 C18orf21Q32NC0 220 aaPredicted RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 TAF1BQ53T94 588 aaPredicted RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 FAM209BQ5JX69 171 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 PRAMEF17Q5VTA0 474 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 PRAMEF13Q5VWM6 474 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 FRMPD2BQ6IN97 320 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 WDR73Q6P4I2 378 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 ZNF517Q6ZMY9 492 aaPredicted RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 SH2D5Q6ZV89 423 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 RNF44Q7L0R7 432 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 PRICKLE2Q7Z3G6 844 aa5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 THOC6Q86W42 341 aaKnown RBP5.96□□□□□ -1.45
ATPAF1-209ENST00000529214 C17orf64Q86WR6 236 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms