RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 WDR73Q6P4I2 378 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 KLC3Q6P597 504 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 KCTD9Q7L273 389 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 MIER3Q7Z3K6 550 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 GGNQ86UU5 652 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 PIM3Q86V86 326 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 AMIGO1Q86WK6 493 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 NUDT13Q86X67 352 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 CCDC60Q8IWA6 550 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 PHC2Q8IXK0 858 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 EFCAB13Q8IY85 973 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 CMTM8Q8IZV2 173 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 WDR36Q8NI36 951 aaKnown RBP4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 MAPK15Q8TD08 544 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 FAM216AQ8WUB2 273 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 TMEM255BQ8WV15 326 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 SYN2Q92777 582 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 DHX58Q96C10 678 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 RHBDF1Q96CC6 855 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 CFAP36Q96G28 342 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 BSCL2Q96G97 398 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 CMKLR1Q99788 373 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 NEURL2Q9BR09 285 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 RAB6CQ9H0N0 254 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 RBM38Q9H0Z9 239 aaKnown RBP4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 C1orf21Q9H246 121 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 LRMDAQ9H2I8 198 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 TM9SF3Q9HD45 589 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 AGPAT5Q9NUQ2 364 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 POT1Q9NUX5 634 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 ANO10Q9NW15 660 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 HPF1Q9NWY4 346 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 TRNAU1APQ9NX07 287 aaKnown RBP4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 RHCGQ9UBD6 479 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 FBXW2Q9UKT8 454 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 CKAP5Q14008 2032 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 MYOFQ9NZM1 2061 aa4.39□□□□□ -1.71
HMGB1P23-201ENST00000518743 PRSS51A0A1B0GVH4 220 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 LILRA5A6NI73 299 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 DUXAA6NLW8 204 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 FAM86B1E9PN63 330 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 I3L4J1 428 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 RTCAO00442 366 aaKnown RBP4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 ADAM10O14672 748 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 YKT6O15498 198 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 TRAPPC3O43617 180 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 RNASEH1O60930 286 aaKnown RBP4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 ERLIN2O94905 339 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLC16A8O95907 504 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 LCATP04180 440 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 FAM86B2P0C5J1 330 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 GAP43P17677 238 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 POLR2CP19387 275 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 CD22P20273 847 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 GNL1P36915 607 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 OPRD1P41143 372 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 MMP15P51511 669 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 EVCP57679 992 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 CD81P60033 236 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SEC61A1P61619 476 aaKnown RBP4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 MTF1Q14872 753 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 Q4G0T1 1027 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 TDRD12Q587J7 1177 aaKnown RBP4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 TPGS2Q68CL5 300 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 TMEM270Q6UE05 265 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 TMEM182Q6ZP80 229 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 ASB18Q6ZVZ8 466 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 Q75L30 129 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 NUP54Q7Z3B4 507 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 NRARPQ7Z6K4 114 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 COMMD2Q86X83 199 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 CACUL1Q86Y37 369 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 GPALPP1Q8IXQ4 340 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 MAB21L3Q8N8X9 362 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 OR2AK2Q8NG84 335 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SAP25Q8TEE9 199 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SSMEM1Q8WWF3 244 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 RND1Q92730 232 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 TAF4BQ92750 862 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLC25A28Q96A46 364 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 STAMBPL1Q96FJ0 436 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SF3B5Q9BWJ5 86 aaKnown RBP4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 LSG1Q9H089 658 aaKnown RBP4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SEMA6AQ9H2E6 1030 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SYNDIG1Q9H7V2 258 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 RNPEPL1Q9HAU8 725 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 MYNNQ9NPC7 610 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 ZBTB40Q9NUA8 1239 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SPHK1Q9NYA1 384 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 NPAP1Q9NZP6 1156 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 AKAP7Q9P0M2 348 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 APPL1Q9UKG1 709 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SNX9Q9Y5X1 595 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLCO1B1Q9Y6L6 691 aa4.38□□□□□ -1.71
HMGB1P23-201ENST00000518743 SONP18583 2426 aaKnown RBP4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 MEGF8Q7Z7M0 2845 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 POLEQ07864 2286 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 A0A1W2PNU3 283 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 MAGEA13PA6NCF6 341 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 OR5K3A6NET4 321 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms